Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1700 |
Symbol | |
ID | 7974768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1830317 |
End bp | 1830829 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792299 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_002943616 |
Protein GI | 239814706 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.114445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGCA TGTCCGCAGC ACAGATTCCC GCCTTCCAGT TGCGGTCCCG CGACGGCGCC GCCGAAGAGA GCCTGGCGCT GGCCGGCATC TGGCGCCGCG CCTGGATCGC GGCCAACCGG AATGCCGCCG TCATCGAGCC GATCACGCAT TGGCTGCGGC GCGTGCAAAC CGAATTCGTA CCGCCCGCGG ACGTGGTGCT GGCCGAGCGC GAAGGCCAGG TGCTCGCCTT CATGGTGCTG CTGGTGCGGC GCGAATATGT GGCGCAGCTG TTCGTCGAAC CGCATCTTCG CAACCAGGGC CTGGGGCAGG CGCTGCTCGA CGAGGCCAGC GTGCGCATGC CGCTCGGCTG GAAGCTTCAC GTGGCCACCA GCAACACCGC GGCGCAGCGC TTCTACGAAC GCTACGGCCT GGTGCGCGGC GCGGTCGACC GGCACCCGGC CAGCGGACGC GAACGGGTCG CCTACCATTG GTATCCGGCG AGCCCGCCGC GGCAGCCGCG TCGCACCGGC TGA
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Protein sequence | MGRMSAAQIP AFQLRSRDGA AEESLALAGI WRRAWIAANR NAAVIEPITH WLRRVQTEFV PPADVVLAER EGQVLAFMVL LVRREYVAQL FVEPHLRNQG LGQALLDEAS VRMPLGWKLH VATSNTAAQR FYERYGLVRG AVDRHPASGR ERVAYHWYPA SPPRQPRRTG
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