| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1625 |
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| Symbol | |
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| ID | 7974693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1757136 |
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| End bp | 1758872 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792225 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_002943542 |
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| Protein GI | 239814632 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.441001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACC TCCACTGGAC TCCGAACTTG CGCACCGCCG TGGCGGCTGC GCTCCTGCTC
GCGGGCGCAA GCGCCTCGAA TGCCGCGTCG CAGGCGCCGG TCGCGGCCGA GCACGGCATG
GTCGTGAGCG CGCAGCACCT GGCCACCAAG GTCGGGGTCG ACGTGCTCCG GCGCGGCGGC
AACGCGGTCG ATGCGGCGGT GGCCGTGGGT TACGCGCTGG CGGTGGTCTA TCCGGCGGCC
GGCAACCTGG GCGGCGGCGG CTTCATGACC GTGCAGCTGG CCGATGGCCG CAAGACGTTC
CTCGACTTCC GCGAGAAGGC CCCGCTGGCC GCCACCGCCA ACATGTACCT CGACAAGGAC
GGCAACGTCA TCAAGGGCTT GAGCACCAAC GGCCATCTGG CCGTCGGCGT GCCGGGCACG
GTCTCGGGCA TGGAATACGC GCGCGAGAAA TACGGCACCA TGAAGCGGGC CGATCTGATC
GCTCCCTCGA TCCAGCTGGC CGAGAAGGGC TTTGCGCTGG AGCAGGGCGA CATCGACATG
CTGCACACCT CCACCAACGA CTTCAAGAAG GACCCGGTTT CCGGCGCCAT CTTCCTGAAC
AAGGGCGAGC CCTTCGCAGT CGGCCAGAAG CTGGTGCAGA AAGACCTCGC CAAGACGCTG
CGCGCCGTGA GCGCCAAGGG CGTCGACGGG TTCTACAAGG GCTGGGTCGG GCAGGCGATC
GTGGCATCGA GCCAGGCCGG CAAGGGCATC ATCACGCAGG CCGACCTCGA CCAGTACAAG
ACGCGCGAGC TTGCGCCGGT CGAGTGCGAC TACCGCGGCT ATCGCGTGGT GTCGGCGCCG
CCGCCGAGCT CGGGCGGCGT GATCATCTGC GAGATGCTCA ACATCCTCGA GGGCTATCCG
CTCAAGGACC TGGGCTTCCG CTCGGCTGAG GCGGTGCACT ACCAGATCGA GGCCATGCGC
CATGCCTACG TGGACCGCAA CAGCTACCTG GGCGACCCCG ACTTCGTGAA GAACCCGCTC
GAGCGCCTGC TCGACAAGGG CTACGCCGAG AAGATCCGCG CCGCCATCGA CCCCAAGAAG
GCCGGCGTCT CCAAGGACAT CAAGCCCGGC GTCGCGCCGC ACGAAGGCAG CAACACCACC
CACTATTCGA TCACCGACCA GCAGGGCAAC GCGGTGTCGG TCACCTACAC GCTGAACGAC
TGGTTCGGCG CCAAGGTCAC GGCCGACAAG ACCGGCGTGC TGCTGAACAA CGAGATGGAC
GACTTCACCG CGAAGATCGG CGTGCCCAAC ATGTACGGCC TGGTGCAGGG CGAGGCCAAT
GCCATCGCTC CAGGCAAGCG CCCGCTGAGC TCGATGAGCC CGACCATCGT CTCCAAGGAC
GGCAAGCCGG TGTTCGTGGT CGGCACGCCC GGCGGCAGCC GCATCATCAC GGCGGTGCTG
CACACCATCC TGAACGTGGT CGACTACGGC ATGAACGTGC AGGAAGCCGT CGACGCGCCG
CGCTTCCACC AGCAGTGGCT GCCCGACGTG ACCAACGTCG AAACCTTCGC CCTGAGCCCC
GACACCCGCA AGATCCTGAC CGACATGGGC CACAACCTGG GCGTGCCGCA GCCAGCCAAC
CACCTGGCGG CGATCATCGT CGGCGCGCCC TCGCTGGGCG GCAAGCCGGT GGGTGCCAAC
CGTTTCTACG GCGCGAACGA CCCGCGCCGC AACACGGGCC TCGCGGCAGG CTACTGA
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| Protein sequence | MQNLHWTPNL RTAVAAALLL AGASASNAAS QAPVAAEHGM VVSAQHLATK VGVDVLRRGG
NAVDAAVAVG YALAVVYPAA GNLGGGGFMT VQLADGRKTF LDFREKAPLA ATANMYLDKD
GNVIKGLSTN GHLAVGVPGT VSGMEYAREK YGTMKRADLI APSIQLAEKG FALEQGDIDM
LHTSTNDFKK DPVSGAIFLN KGEPFAVGQK LVQKDLAKTL RAVSAKGVDG FYKGWVGQAI
VASSQAGKGI ITQADLDQYK TRELAPVECD YRGYRVVSAP PPSSGGVIIC EMLNILEGYP
LKDLGFRSAE AVHYQIEAMR HAYVDRNSYL GDPDFVKNPL ERLLDKGYAE KIRAAIDPKK
AGVSKDIKPG VAPHEGSNTT HYSITDQQGN AVSVTYTLND WFGAKVTADK TGVLLNNEMD
DFTAKIGVPN MYGLVQGEAN AIAPGKRPLS SMSPTIVSKD GKPVFVVGTP GGSRIITAVL
HTILNVVDYG MNVQEAVDAP RFHQQWLPDV TNVETFALSP DTRKILTDMG HNLGVPQPAN
HLAAIIVGAP SLGGKPVGAN RFYGANDPRR NTGLAAGY
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