Gene Vapar_1619 details

Gene Information

• Locus tag: Vapar_1619
• ID: 7974848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 1749331
• End bp: 1749921
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644792219
• Product: hypothetical protein
• Protein accession: YP_002943536
• Protein GI: 239814626

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAAT TCAAGCTCGC ACTTCTGACC GTCGCCCTGG CCGGCAGCTC CATGGCCGCC 
ATGGCGCAGG ACAAGGCTGC GCTCATCAAG CAATTCATCG ACGTGCAGCG CCCCGGCATC 
GAATCGCTGG CCCGCGGCCT GGTCGAGCAA TCGAGCGCCC CCATCGCGCA AGCCGGCTCG 
CAGTACCTGC AGACGCAAGT GCCCGAAGCC AAGCGCGAAT CGGCCGCCAA GGCTGCCGAC 
GCCGAACTCA AGAAGTACTT CGACGAGGCC TACCCGATCG TGCGCGACAA GGCCGTGCAA 
CTGGCCCCCG GCGCCCTGAC CCCGCTGCTC GAGCAGAACT TCAGCGAAGA AGAACTCAAG 
CAGCTGCTGG CCTGGATCAA CTCGCCGCTC AGCAAGAAGT ACCAGGACCT CAATCCGAAG 
ATGCAGACCG CGCTGACCGA AAAGCTCGTG AACGACACGC GCGCCACCAT CGAGCCGAAG 
ATGCGCGCGC TGGACGAGAA CGTGGCCAAG GCATTGGGTG CACCGACCGG CGGCTCGCAG 
CAAGGCGCCG CCCCCGCCAA GGCACCGGCC AAGGCTCCCG CCAAGAAGTG A 

 

Protein sequence

MKKFKLALLT VALAGSSMAA MAQDKAALIK QFIDVQRPGI ESLARGLVEQ SSAPIAQAGS 
QYLQTQVPEA KRESAAKAAD AELKKYFDEA YPIVRDKAVQ LAPGALTPLL EQNFSEEELK 
QLLAWINSPL SKKYQDLNPK MQTALTEKLV NDTRATIEPK MRALDENVAK ALGAPTGGSQ 
QGAAPAKAPA KAPAKK