Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1599 |
Symbol | |
ID | 7974828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1729128 |
End bp | 1730150 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792199 |
Product | protein of unknown function DUF182 |
Protein accession | YP_002943516 |
Protein GI | 239814606 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATC TCGACGTCAT GGTGCTGCGC ACGCTGCGCG ACTGGCGGCG CGCCGGCAAG CGCGCGCTGC TCACGACCGT GGTGCGCACC TGGGGCTCGT CGCCGCGGCC GGTCGGTTCG ATCATGGCGC TGGCCGACGA TGGCGCGGTG GTGGGCTCGG TCTCCGGCGG CTGCATCGAG GACGACCTGA TCGCGCGCTA CAGCCATGCG CACGGCAACG GCGAACAGGT GCCCGTGGGC GCGCCGCCCG TGCTCGTGAA GTACGGCATC ACGGCCGACG AGGCGCACCG CTTCGGCCTG CCCTGCGGCG GCACGCTGGA GCTGCTGCTC GAATACGACC CCGACGCGGC CTTGCTCGAC ACGCTCGTGG CCCAGCTGGA GCAAGGCCGG CTCATGCAGC GCACCGTCAC GCTTTCGACC GGTGCCGTGC GCCTGGCCGA AGCCACCGCG CCCGATGCGC TCAAGGTGAA CGACACCGAG CTCACCAACA CCTTCGGCCC CGAATACCGC ATGCTGCTGA TCGGCGCCGG CCAGCTGGCC GAATACCTCG CGACCATGGC CAAGTTCAGC GGCTTTGCCG TGACGCTGTG CGACCCGCGT GCCGAATACC GCACCGCATG GACGCTCGCC GGCGTGGAGA TCACGACCGA GATGCCCGAC GACGCGGTGC TGGCCTTCAA GCCCGACCGC CGCAGCTGCG TGGTGGCGCT CACGCACGAC CCCAAGCTCG ACGACCTTGC GCTGCTCGAA GCACTGCAGA GCGAGGCCTT CTACGTCGGC GCGATCGGCT CGCGCCGCAA TGCCGAGGCG CGGCGCGGCC GCATGATCGA GCACTTCGGC CAGACAGAGG AATCGCTCGC ACGACTGCGC GGACCCATCG GCATCTACAT CGGCAGCAAG ACGCCGCCCG AGATCGCCGT GAGCGTGATG GCCGAGATCC TGGCCGTGAA GAACGCGGTG ACGCTGCCGC GCGAAATGGA AGTGGCGCGC GCCAAGGGCA TGCAGCAGCT CGCGATGAGC TGA
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Protein sequence | MENLDVMVLR TLRDWRRAGK RALLTTVVRT WGSSPRPVGS IMALADDGAV VGSVSGGCIE DDLIARYSHA HGNGEQVPVG APPVLVKYGI TADEAHRFGL PCGGTLELLL EYDPDAALLD TLVAQLEQGR LMQRTVTLST GAVRLAEATA PDALKVNDTE LTNTFGPEYR MLLIGAGQLA EYLATMAKFS GFAVTLCDPR AEYRTAWTLA GVEITTEMPD DAVLAFKPDR RSCVVALTHD PKLDDLALLE ALQSEAFYVG AIGSRRNAEA RRGRMIEHFG QTEESLARLR GPIGIYIGSK TPPEIAVSVM AEILAVKNAV TLPREMEVAR AKGMQQLAMS
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