| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1586 |
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| Symbol | |
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| ID | 7974815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1715489 |
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| End bp | 1716745 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792186 |
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| Product | amidase, hydantoinase/carbamoylase family |
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| Protein accession | YP_002943503 |
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| Protein GI | 239814593 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.484482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAC CCACCCCACT GCGCATCAAC GGCGACCGTC TCTGGAGCTC GCTGATGGAA
CTGGCGAAGC TCGGCGCCAC CGAGAAGGGC GGCGTCTGCC GCATCGCGCT GACCGACCTC
GACCGCCAGG GCCGCGACCT CTTCACCCGC TGGGCGCGCG AAGCCGGCTG CGAGGTGCGC
GTCGATCGGA TCGGCAACAT CTTTGCGCGC CGCGCCGGCC GCGACAACAC GCGTCCGCCG
GTGGTCACCG GCAGCCACAT CGACACCCAG CCCACGGGCG GCAAGTTCGA CGGCAACTAT
GGCGTGCTGG CCGGGCTGGA GGTGATCCGC AGCCTCAACG ATGCCAAGGT CGTGACCGAA
GCGCCGCTGG AAATTGCGGT GTGGACCAAT GAGGAAGGCT CGCGCTTCGT GCCTGTGATG
ATGGGCTCGG GCGTGTTCGC CGATGCCTTC ACGCTCGAGC ATGCCCTCGC GCAGCGCGAC
AACGACGGCA TCAGCGTGGC CGAGGCGCTG GCTTCCATCG GCTATGCGGG CAGCGCGCCG
GCTTCGGCCG CGGCGTCGCC CGTGGGCGCG TATTTCGAGG CGCACATCGA GCAGGGACCG
GTGCTCGAGG CCAACGAGCG CGTGATCGGC GTGGTCGAGG GCGCGCTCGG CCAGCGCTGG
TACGACGTGG TGGTGCAGGG CATGGAAGCG CATGCCGGCC CCACGCCGAT GGAGCTGCGC
AAGGACGCGC TGCTCGCGGC CTCCGAACTG GTGATCGAGG TCAACCGCAT CGCGCTGGCC
CATGCGCCGC ATGCGCGCGG CACGGTGGGC TGGATCGACA ACTATCCGAA TTCGCGCAAC
GTGATCCCGG GCCGCGTGAA GCTCAGCGTC GACCTGCGCG CGGCCGACGA CGTGGTGCTG
TCGGCCATGG ACGCCGAGCT GAAGGAGGCG GTACAGCGCA TCGCCGCCAA GGGCAAGGTC
GAGGCCACAG TGGAGCAGGT CGTCTACTTT CCGCCGCAGC CCTTCACGCC TGCGCTGGTG
TCGGCCATTC GAGAGGCCGC GCAGCAGCAG GGCATGACCT GGATGAAAGT GATCAGCGGC
GCGGGCCATG ACGCGGTGTA CCTCGCGCGC GTGTGCCCCA CGGCGATGAT CTTCGTGCCC
TGTCTCGACG GCATCAGCCA CAACGAGATC GAGGATGCGC AGCCCGGCCA CCTCGAGGCC
GGCTGCAATG TGCTGCTGCA GGCGATGCTG CAAAGCGCGG GAGTGGCGTC GTCATGA
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| Protein sequence | MNSPTPLRIN GDRLWSSLME LAKLGATEKG GVCRIALTDL DRQGRDLFTR WAREAGCEVR
VDRIGNIFAR RAGRDNTRPP VVTGSHIDTQ PTGGKFDGNY GVLAGLEVIR SLNDAKVVTE
APLEIAVWTN EEGSRFVPVM MGSGVFADAF TLEHALAQRD NDGISVAEAL ASIGYAGSAP
ASAAASPVGA YFEAHIEQGP VLEANERVIG VVEGALGQRW YDVVVQGMEA HAGPTPMELR
KDALLAASEL VIEVNRIALA HAPHARGTVG WIDNYPNSRN VIPGRVKLSV DLRAADDVVL
SAMDAELKEA VQRIAAKGKV EATVEQVVYF PPQPFTPALV SAIREAAQQQ GMTWMKVISG
AGHDAVYLAR VCPTAMIFVP CLDGISHNEI EDAQPGHLEA GCNVLLQAML QSAGVASS
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