Gene Vapar_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1569 
Symbol 
ID7974798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1696412 
End bp1696678 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content67% 
IMG OID644792169 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_002943486 
Protein GI239814576 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGG TCCCTTCTTC CGCCACGTCC AGCCCGGCCG CCACGCCCGA CACGGGGCCG 
CTGCCGGCCA GCTACGAAGC CGGGCTCCAG GAGTTGGAAC AATTGGTTGC AGAACTCGAG
TCGGGCCAAT TGCCGCTCGA CCAGCTGCTC GGCAGCTACC AGCGCGGCGC CGCGCTGCTC
GCCTTCTGCC GCGAAAAGCT CCAGGCGGTC GAAGACCAGA TCAAGGTGCT CGACGCCGGG
AGCCTCAAGC CCTGGACTGC CGAATGA
 
Protein sequence
MPKVPSSATS SPAATPDTGP LPASYEAGLQ ELEQLVAELE SGQLPLDQLL GSYQRGAALL 
AFCREKLQAV EDQIKVLDAG SLKPWTAE