| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1548 |
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| Symbol | |
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| ID | 7974777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1673272 |
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| End bp | 1674171 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792148 |
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| Product | Carboxymethylenebutenolidase |
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| Protein accession | YP_002943465 |
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| Protein GI | 239814555 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTTC GCGACGACAG CCGTTCCGAT TTCGATTCGC TTCGCCCCGG CCAGAGCACC
GAGCAGGGCA CCACGCGCCG CACCGCGCTC AAGGCTGCCA TTGGCGTGGG CTATGCGGCC
GCGGTCATGC CGGTCATGGC GCAGACCGCC GTCAGCACCT CGGCCGAAGG CCTGAAGGCC
GGCCCGGTCA AGTACACCGT CAATGGCTTC GAGGTGCCGG CCTATGCGGC CGCGCCGGCC
GGCAAGACCG GCCTGCCCGT GATCCTGGTG ATCCAGGAAA TCTTCGGCGT GCACGAGTAC
ATCGCCGACA CCTGCCGGCG CTTCGCCCAG CTCGGCTACC TGGCCATTGC GCCCGAACTC
TATGCACGGC AGGGCGATGC CAAGAGCTAC ACCGACATTC CCAAGCTGCA GGCCGACATC
GTGAGCAAGG TGCCCGATGC GCAGGTCATG GCCGACCTCG ACGGCGCGCT GGCCTACGCC
GCGGCCAATG GCGGCAGCGT GGCCAAGGCC GGCATCACCG GCTTCTGCTG GGGCGGCCGC
ATCGTGTGGC TCTATGCGGC CACCGGCAAG GTGAAGGCCG GCGTGGCCTG GTACGGCCGG
CTGGTCGGCC AGCCGAGCCA ACTCACGCCC AGGCATCCGA TCGACGTCGC GGCCAGCCTG
CAGGCGCCCG TGCTCGGCCT CTACGGCGGC AAGGACCAGG GCATCCCCCT TGACACGGTT
GATAAGATGA AAGCCGCCCT GGCCACCGGA ACCCCGGCGG CCAAGGCTTC GAGCTTCGTC
GTGTATCCCG AAGCAGGCCA CGCGTTCCAT GCCGACTACC GCCCGAGCTA TGTAAAGAGC
GCGGCCGAAG ACGGATGGCA GCGCGCCACG GCCTGGTTCA AAGCCAATGG CGTCGCCTGA
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| Protein sequence | MSLRDDSRSD FDSLRPGQST EQGTTRRTAL KAAIGVGYAA AVMPVMAQTA VSTSAEGLKA
GPVKYTVNGF EVPAYAAAPA GKTGLPVILV IQEIFGVHEY IADTCRRFAQ LGYLAIAPEL
YARQGDAKSY TDIPKLQADI VSKVPDAQVM ADLDGALAYA AANGGSVAKA GITGFCWGGR
IVWLYAATGK VKAGVAWYGR LVGQPSQLTP RHPIDVAASL QAPVLGLYGG KDQGIPLDTV
DKMKAALATG TPAAKASSFV VYPEAGHAFH ADYRPSYVKS AAEDGWQRAT AWFKANGVA
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