| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1536 |
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| Symbol | |
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| ID | 7973136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1654775 |
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| End bp | 1657204 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792136 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002943453 |
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| Protein GI | 239814543 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTT TCGGCTCGTA CGACGCCACT GCCGGCGCAC CCCCATCCCC AGCGGCCGAT
TCGCCCCTGC TCGCCAACCT CAACCCCGAG CAGCGTGCCG CGGTCACCCT GCCTGCGGGC
AATGCGCTGA TCCTTGCCGG CGCCGGTTCG GGCAAGACGC GGGTGCTGAC CACCCGCATC
GCCTGGCTGC TGCAGACCGG CCAGGTCTCC CCCGGCGGCA TCCTGGCCGT GACCTTCACC
AACAAGGCCG CCAAGGAAAT GATGACGCGG CTCACGGCAA TGCTGCCCGT CAACGTGCGC
GGCATGTGGA TCGGCACCTT CCACGGCTTG TGCAACCGCT TTTTGCGCGC GCACTGGAAG
CTGGCCAACC TGCCGTCCAC CTTCCAGATC CTCGACACGC AGGACCAGCT CTCGGCCATC
AAGCGGCTCA TGAAGCAGTT CAACGTCGAC GACGAGCGCT TTCCGGCCAA GCAGACCCAG
TGGTTCATCG CCGGCGCCAA GGAAGACGGC CTGCGCCCGA AGGACGTGGA GATCCGCACC
GAAGACGACC GCAAGAAGGT CGAGCTCTAC CAGCTCTACG AAGAGCAGTG CCAGCGCGAA
GGCGTGGTCG ACTTCGGCGA ACTCATGCTG CGCAGCTACG AACTGCTGCG CGACAACGAC
CCGGTGCGCG AACACTACCA GCGGCGCTTC CGCCACATCC TGATCGACGA GTTCCAGGAC
ACCAACCGCC TGCAGTACGC GTGGATCAAG ATGCTCTCGG GCAGCACCGC GGCCGGAGGC
CAGTTCGTGC CGGGCGAGAA CAACAGCGTG ATTGCCGTGG GCGACGACGA CCAGAGCATC
TACGCCTTTC GCGGCGCGCG CGTGGGCAAC ATGGCCGACT TCGTGCGTGA GTTCGATGTG
CGCCACCAGA TCAAGCTGGA GCAGAACTAC CGCAGCTACA GCAACATCCT CGACTCGGCC
AACGAGCTCA TCAGCCACAA CAAGAAGCGC CTGGGCAAGA ACCTGCGTAC CGACCAGGGC
CCCGGCGAGC CGGTGCGCGT GTACGAGTCG CCCACCGACC TGGCCGAGGC GCAGTGGATG
GTCGAGGAAA TGCGCCAGCT CGTGCGCGAC GGCTTCGACC GCAAGGAAAT GGCCGTGCTC
TACCGCAGCA ATGCGCAGAG CCGGGTGATC GAGACGGCGC TCTTCAACGC CTCGGTGCCG
TACCGCGTGT ATGGGGGCCT GCGCTTCTTC GAGCGCGCCG AAATCAAGCA CGCGCTGGCC
TACCTGCGCC TGCTCGAGAA CAAGGACGAC GACACCAGCT TCCTGCGCGT GGTCAACTTT
CCGCCGCGCG GCATCGGTGC GCGCACGCTC GAGCAGCTGC AGGACGCGGC GCGCACGGCC
GGCCGCTCGC TGCACGACGC GGTGCATGCC GTCGGCGGCA AGGCGGGCTC GAACCTCACG
GCCTTCGTCG CCAAGATCGA CGTGCTGCGC GAGCAGACGC AGGGCGCGAG CCTGCGCGAG
ATCATCGAGC TGGTGCTCGA CCACAGCGGC CTCGTCGAAC ACTACAAGGC CGACCGCGAA
GGCGCCGACC GCATCGAGAA CCTGGAAGAA CTGGTGAACG CGGCCGAGAG CTTCGTCACG
CAGGAAGGCT TCGGCCGCGA TGCCGTGGCG CTGCCCATCG ACGAACTGCG CCAGTCGCCC
GCGAGCCAGG GCCTGGACCC GAACCGGCCC GTCATCGACG AGCCGCTCGC GCCCGATGCC
GAGACCGGCG AAACGCTGAG CCCGCTGGCC GCGTTCCTCA CGCATGCGGC GCTCGAGTCG
GGCGACAACC AGGCGCAGGC CGGGCAGGAC GCGGTGCAGC TCATGACCGT GCACGCCGCC
AAGGGCCTGG AGTTCGACTG CGTGTTCATC ACCGGCATGG AAGAGGGCCT GTTCCCGCAC
GAGAACTCCA TGAGCGACTT CGAGAGCCTC GAGGAAGAGC GCCGCCTGAT GTACGTGGCG
ATCACGCGCG CACGCAAGCG CCTGTACCTG AGCCATTCGC AGACGCGCAT GCTGCACGGC
CAGACGCGCT ACAACGTGAA GAGCCGCTTC TTCGAGGAAC TGCCCGAAGG CGCGCTCAAG
TGGCTCACGC CGAAGAACCA GGGCTTCACG CCCTCGGCCT TCGGCTATGG CGGCGGCTAT
GCGAGCACGC GCGGCGGTGG CGGCAGTTAC AGCAGCGGTG GCGGCTACGG CGGCAGCAAG
GACACTTTCG CGAGCCCGCC GGTGCCGCCG CAGAAGGCCG CGCCCTCGCA CGGCCTGCGC
TCGGGCATGC AGGTGTTCCA CAACAAGTTC GGCGAAGGCA CGGTGCTGTC GCTCGAAGGC
AGCGGCGACG ATGCGCGCGC GCAGGTCAAG TTCGCTCGCC ATGGCGTGAA GTGGCTTGCG
CTGTCGGTGG CCAAGCTCAC GCCGGTGTGA
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| Protein sequence | MSLFGSYDAT AGAPPSPAAD SPLLANLNPE QRAAVTLPAG NALILAGAGS GKTRVLTTRI
AWLLQTGQVS PGGILAVTFT NKAAKEMMTR LTAMLPVNVR GMWIGTFHGL CNRFLRAHWK
LANLPSTFQI LDTQDQLSAI KRLMKQFNVD DERFPAKQTQ WFIAGAKEDG LRPKDVEIRT
EDDRKKVELY QLYEEQCQRE GVVDFGELML RSYELLRDND PVREHYQRRF RHILIDEFQD
TNRLQYAWIK MLSGSTAAGG QFVPGENNSV IAVGDDDQSI YAFRGARVGN MADFVREFDV
RHQIKLEQNY RSYSNILDSA NELISHNKKR LGKNLRTDQG PGEPVRVYES PTDLAEAQWM
VEEMRQLVRD GFDRKEMAVL YRSNAQSRVI ETALFNASVP YRVYGGLRFF ERAEIKHALA
YLRLLENKDD DTSFLRVVNF PPRGIGARTL EQLQDAARTA GRSLHDAVHA VGGKAGSNLT
AFVAKIDVLR EQTQGASLRE IIELVLDHSG LVEHYKADRE GADRIENLEE LVNAAESFVT
QEGFGRDAVA LPIDELRQSP ASQGLDPNRP VIDEPLAPDA ETGETLSPLA AFLTHAALES
GDNQAQAGQD AVQLMTVHAA KGLEFDCVFI TGMEEGLFPH ENSMSDFESL EEERRLMYVA
ITRARKRLYL SHSQTRMLHG QTRYNVKSRF FEELPEGALK WLTPKNQGFT PSAFGYGGGY
ASTRGGGGSY SSGGGYGGSK DTFASPPVPP QKAAPSHGLR SGMQVFHNKF GEGTVLSLEG
SGDDARAQVK FARHGVKWLA LSVAKLTPV
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