| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1508 |
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| Symbol | |
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| ID | 7973106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1631859 |
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| End bp | 1633466 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792106 |
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| Product | crotonobetaine/carnitine-CoA ligase |
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| Protein accession | YP_002943425 |
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| Protein GI | 239814515 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGTG AAGTGCGCGC GCTGCCGCCG GACCAGCGCA CGCTGCCCGC GATGCTGCAG
CGGCAGTCGG AACGCTTCGC CGGGCGCCCG TTGCTGCGGA TCGCGGGCCG GCAGTGGACG
CATGGCGACG CGGCCGAGGC GGCTGCGGTG CGTGCCGGCG CGCTGGCCGC GGCCGGCGTG
GCGCGCGGCG ACCGCATTGC GGTGATGTGC GGCAACCGCA TCGAGTTTCT CGAGACCTTT
CTGGGTGCCG GCTGGCTCGG CGCCTCGGTG GTGCCGGTCA ACACTGCGTC GATGGGTCCG
CAGATCGAAT ACTTCCTTGC CAACAGCGAG GCGAAGCTGC TGGTGGTCGA GGCGGGCTTT
CTCGAGCGGC TGGCGACGGC CGACCTGGGG CGCACGGCGC TGCGTGAGCT CTGGATCGTC
GGCGAGGCGC CTGCTTCATG GACGCCGCCT GCGGGCGTTC GCGCCTCCAG CTACCCGCAA
GGCGCACAGG CCATCGCACC GGCCGCGGTG CAGCCTGGCG ATCCGCTCGC CATCCTCTAC
ACCTCCGGCA CCACCGGCCC GGCCAAGGGC GTGGTCTGTC CGCATGCGCA GTATTTCTGG
TGGGGCGTGA ACAGCGCCGA AGTGCTCGGC GTCGGCCGCG ACGACGTGCT GTGCACCACG
CTGCCGCTGT TCCACATCAA CGCGCTCAAC ACCTTCGCGC AGGCCGCGCT GACCGGCGCC
GAAGTGGTGT TCGAATCGCG CTTCTCGGCC TCGGGCTTCT GGCCGTCGAT GCGCGCCAAT
GGGGCGACCG TGGTCTACCT GCTGGGCGCG ATGGTGCCGA TCCTGCTGGC CCAGCCCGAA
GGCGAAGCCG AGCGCGAACA CCGCGTGCGC ATCGGGCTCG GGCCGGGCGT GCCCTCGGCG
GCCGGGCAGG CCTTCAGGGC GCGCACCGGC GTGGCGCTGC TCGAAGGCTA TGGCTCGACC
GAGACCAACT TCGCGATTGC CACCGCCCCG GATTCGCCGC GCGGCGGCGT CATGGGCTGG
CTGCGCCCCG GCTTTCAGGC GCGCGTGGCC GACGAGGGCG ATGTGGAGCT GCCCGCAGGC
GAACCCGGCG AACTGCTGCT GCGCGCGGAC GAACCCCACG CCTTTGCGAG CGGCTACTTC
AACATGCCCG AGAAGACGGT CGAGGCCTGG CGCAACCTCT GGTTCCATAC CGGCGACCGC
GTGGTGCGCG ATGCTGATGG CGCCTTTCGC TTTGTCGACC GCATCAAGGA CGCGATACGC
AGGCGCGGCG AGAACATCTC GTCCTTCGAA GTCGAGCAGG TGCTGCTGAG CCACCCCGGC
GTGGCCTCCT GCGCCGTGTA CCCGGTGCAG TCCGAACTGG CCGAGGACGA GGTGATGGCC
GCGCTGGTGC CGCGCGAGGG CCAGCGCATC GACCCGGCCG AACTGGCGCG CTTCTGCGAG
AGCCGGCTGC CGTACTTCGC GGTGCCGCGC TACATCGACG TGCTGGCCGA CCTGCCGCGC
ACCGAGAACG GCAAGGTGCA GAAGTTCAAG CTGCGCGAGC GCGGCGTCAG CGAACAGACC
TGGGACGGGC GGCCCGCTGC CGTTCGTCCC CCGGCAAGGA CCGCATGA
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| Protein sequence | MTSEVRALPP DQRTLPAMLQ RQSERFAGRP LLRIAGRQWT HGDAAEAAAV RAGALAAAGV
ARGDRIAVMC GNRIEFLETF LGAGWLGASV VPVNTASMGP QIEYFLANSE AKLLVVEAGF
LERLATADLG RTALRELWIV GEAPASWTPP AGVRASSYPQ GAQAIAPAAV QPGDPLAILY
TSGTTGPAKG VVCPHAQYFW WGVNSAEVLG VGRDDVLCTT LPLFHINALN TFAQAALTGA
EVVFESRFSA SGFWPSMRAN GATVVYLLGA MVPILLAQPE GEAEREHRVR IGLGPGVPSA
AGQAFRARTG VALLEGYGST ETNFAIATAP DSPRGGVMGW LRPGFQARVA DEGDVELPAG
EPGELLLRAD EPHAFASGYF NMPEKTVEAW RNLWFHTGDR VVRDADGAFR FVDRIKDAIR
RRGENISSFE VEQVLLSHPG VASCAVYPVQ SELAEDEVMA ALVPREGQRI DPAELARFCE
SRLPYFAVPR YIDVLADLPR TENGKVQKFK LRERGVSEQT WDGRPAAVRP PARTA
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