Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1451 |
Symbol | |
ID | 7971279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1576073 |
End bp | 1577008 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644792049 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_002943368 |
Protein GI | 239814458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACCG CCACCACGCC CAACGCCATC CGCCACTACC TGCAGTTCTC GGACTTCACG GCCGACGAAT ACGCCTATCT TTTCGATCGC ATGGCGATCA TCAAGAAGAA GTTCAAGACC TACGAGAAGC ACCAGCCGCT GACCGACCGC ACGCTGGCCA TGATCTTCGA GAAGGCCAGC ACGCGCACCC GCGTGAGCTT CGAGGCGGGC ATGTACCAGC TCGGCGGCAG CGTGGTGCAC CTGACCACCG GCGACAGCCA GCTCGGCCGC GCCGAGCCCA TCGAGGACAG CGCCAAGGTC ATCAGCCGCA TGGTCGACCT CGTGATGATC CGCACCTACG AGCAGACCAA GATCGACACC TTCGCCGCAC ATTCGCGCGT GCCGGTGATC AACGGGCTGA CCAACGAATT CCACCCCTGC CAGATCCTTG CGGACATCTT CACCTACATC GAGCACCGCG GTTCGATCCA GGGCAAGACG GTGGCCTGGG TCGGCGACGG CAACAACATG GCCAACACCT GGCTGCAGGC CAGCGAGATC CTCGGCTTCA AGGTGCACGT GAGCACGCCC AGCGGCTACG AGGTCGACCA GTCGGTGGCG GGCCTGCGCT CGGCCGACAG CTACCAGGTC TTCAAGGACC CGATGGAAGC CTGCCGCGGC GCCGACCTGG TGACCACAGA CGTCTGGACC AGCATGGGCT ACGAGTCCGA GAACGAGGCC CGCCGCAAGG CCTTTGCCGA CTGGTGCGTC GACGAGGACA TGATGCGCAT CGCCCAGCCC GACTCGCTCT TCATGCACTG CCTGCCGGCA CACCGCGGCG AGGAAGTGCA GGCCGAGGTC ATCGACGGTC CGCAGTCGGT GGTGTGGGAC GAGGCCGAGA ACCGGCTCCA TGCGCAGAAG GCGCTGATGG AGTTTCTGCT GCTGGGGCGG CTCTGA
|
Protein sequence | MTTATTPNAI RHYLQFSDFT ADEYAYLFDR MAIIKKKFKT YEKHQPLTDR TLAMIFEKAS TRTRVSFEAG MYQLGGSVVH LTTGDSQLGR AEPIEDSAKV ISRMVDLVMI RTYEQTKIDT FAAHSRVPVI NGLTNEFHPC QILADIFTYI EHRGSIQGKT VAWVGDGNNM ANTWLQASEI LGFKVHVSTP SGYEVDQSVA GLRSADSYQV FKDPMEACRG ADLVTTDVWT SMGYESENEA RRKAFADWCV DEDMMRIAQP DSLFMHCLPA HRGEEVQAEV IDGPQSVVWD EAENRLHAQK ALMEFLLLGR L
|
| |