| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1436 |
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| Symbol | |
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| ID | 7971264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1557828 |
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| End bp | 1560416 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792034 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_002943353 |
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| Protein GI | 239814443 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAAG CCTACGTTGA CCATGTTGCC GAACGCGCCG CGCTCGGTAT TCCGCCGCTG
CCATTGAGCG CGAAGCAAAC CGCCGAAGCC ATCGAGCTCC TCAAGAGCGC GAATGCCAAG
GACGGTGCCT TCCTGCTCGA TCTGCTCACC CATCGCGTGC CCGCCGGCGT CGACGACGCG
GCCAAGGTCA AGGCGAGCTA CCTGGCGGCC GTGGCCCACG GCACCGAGAA GAACGCGTTC
ATCTCGCGTG CGCGTGCCAC CGAACTGCTC GGCACCATGC TCGGCGGCTA CAACATCAGC
CCGATGATCG ACCTGCTCGA CGACGCCGAA GTCGGCGCCG TGGCGGCCGA GGGCCTGAAG
AAGACCCTGC TGATGTTCGA CCAGTTCCAC GACGTCAAGG AAAAGGCCGA CAAGGGCAAC
GCCCACGCCA AGGGCGTGCT GCAAAGCTGG GCCGATGCCG AATGGTTCAC CAGCCGTCCC
GAAGTGCCGC AAAGCATCAC GGTCAGCATC TTCAAGGTGG CCGGTGAAAT CAACACCGAC
GACCTCTCTC CCGCACCCGA CGCCACCACA CGTCCCGACA TTCCGATGCA CGCGCTGGCG
ATGCACAAGA ACGCCCGCCC CGGCATCGTC CCTGAAGAAG ACGGCAAGCG CGGCCCGGTG
AAGTTCATCG AGGACCTGCG CGCGCGCGGC CACCTCGTGG CTTATGCCGG CGACGTGGTC
GGCACGGGTT CGTCGCGCAA GAGCGCAACC AACTCGGTGC TGTGGTTCAC CGGCGAAGAC
ATTCCCTTCG TGCCCAACAA GCGCTTCGGC GGCGTCTGCC TCGGCGGCAA GATCGCGCCG
ATCTTCTACA ACACCATGGA AGACTCGGGC GCGCTGCCCA TCGAGCTCGA CGTGAGCCAG
ATGAACATGG GCGACGTGGT CGAGCTGCGT CCCTACGAAG GCAAGGCCCT CAAGGATGGC
AAGGTGATTG CCGAGTTCAA GGTCAAGAGC GACGTGCTGT TCGACGAAGT GCGCGCCGGC
GGCCGCATTC CGCTGATCAT CGGCCGCGGC CTCACGGCCA AGGCGCGCGA GGCGCTGGGC
CTGCCCGTCT CCACGCTGTT CCGCCTGCCG CAGAGCCCGG TCGACACCAA GAAGGGCTTC
TCGCTCGCGC AGAAGATGGT CGGCCGCGCC TGCGGCCTGC CCGAAGGCCA GGGCGTGCGC
CCCGGCACCT ACTGCGAACC CAAGATGACC TCGGTCGGCT CGCAGGACAC CACCGGCCCG
ATGACGCGCG ACGAGCTGAA AGACCTGGCT TGCCTGGGCT TCTCGGCCGA CCTCGTGATG
CAGTCGTTCT GCCACACGGC GGCCTACCCG AAGAAGGTCG ACGTCAAGAT GCACCATGAA
CTGCCCGATT TCATGGCCAA CCGCGGCGGC GTCTCGCTGC GCCCGGGCGA CGGCGTGATC
CATTCCTGGC TCAACCGCCT GCTCACGCCA GACACCGTCG GCACCGGCGG CGACAGCCAC
ACCCGCTTCC CGATCGGCAT CAGCTTCCCG GCAGGCTCCG GCCTCGTGGC CTTCGCGGCC
GCCACCGGCG TGATGCCGCT GGACATGCCC GAGTCGGTGC TCGTGCGCTT CAAGGGCAAG
ATGCAGCCCG GCGTCACGCT GCGCGACCTG GTCAACGCGA TTCCGCTGTA TGCCATCAAG
AGCGGCCTGC TCACGGTCGA GAAGAAGGGC AAGAAGAACA TCTTCTCGGG CCGCATCCTC
GAGATCGAGG GCCTGCCGGA CCTGAAGGTG GAGCAAGCCT TCGAGCTGAG CGACGCCTCG
GCCGAGCGCT CGGCCGCCGG CTGCACGGTG CACCTGAACA AGGAACCGAT CATCGAGTAC
ATCAACAGCA ACATCACGCT GATGAAGTGG ATGATCGCCG AAGGCTATGC CGACGCCCGC
ACGCTGGCGC GCCGCATCGC CGCGCAGGAA GCCTGGCTGG CGGACCCGCA ACTGCTCAAG
GGCGACGCCG ACGCCGACTA CGCCGCCGTC ATCGAGATCG ACCTGGCCGA CATCCACGAG
CCGATCGTGG CCTGCCCGAA CGACCCCGAC GACGTGAAGA CGCTGAGCGA CGTGGCCGGC
GCCCAGATCG ACGAAGTGTT CATCGGCTCG TGCATGACCA ACATCGGCCA CTTCCGTGCG
GCTTCCAAGC TGCTCGAAGG CAAGCGCGAC ATCCCGGTCA AGCTGTGGAT TGCACCGCCC
ACCAAGATGG ATGCGCACCA GCTCACCGAG GAAGGCCACT ACGGCGTGTT CGGCAATGCC
GGTGCACGCA CCGAGATGCC GGGCTGCTCG CTGTGCATGG GCAACCAGGC GCAGGTGCGC
GAAGGCGCCA CGGTGATGTC GACCAGCACC CGCAACTTCC CCAACCGCCT GGGCAAGAAC
ACCAACGTGT ACCTGGGCTC GGCCGAGCTG GCCGCGATCT GCTCGCGCCT GGGCCGCATC
CCGACGCGCG AGGAGTACAT GGCCGCCACG GGCGTGCTCG ACGCATCGAG CGCGCAGATC
TACCAGTACC TGAACTTCGA CAAGATCGAC GACTACAAGA CCGAGGCCGG CGCCGCAGTC
GCGGCCTGA
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| Protein sequence | MLQAYVDHVA ERAALGIPPL PLSAKQTAEA IELLKSANAK DGAFLLDLLT HRVPAGVDDA
AKVKASYLAA VAHGTEKNAF ISRARATELL GTMLGGYNIS PMIDLLDDAE VGAVAAEGLK
KTLLMFDQFH DVKEKADKGN AHAKGVLQSW ADAEWFTSRP EVPQSITVSI FKVAGEINTD
DLSPAPDATT RPDIPMHALA MHKNARPGIV PEEDGKRGPV KFIEDLRARG HLVAYAGDVV
GTGSSRKSAT NSVLWFTGED IPFVPNKRFG GVCLGGKIAP IFYNTMEDSG ALPIELDVSQ
MNMGDVVELR PYEGKALKDG KVIAEFKVKS DVLFDEVRAG GRIPLIIGRG LTAKAREALG
LPVSTLFRLP QSPVDTKKGF SLAQKMVGRA CGLPEGQGVR PGTYCEPKMT SVGSQDTTGP
MTRDELKDLA CLGFSADLVM QSFCHTAAYP KKVDVKMHHE LPDFMANRGG VSLRPGDGVI
HSWLNRLLTP DTVGTGGDSH TRFPIGISFP AGSGLVAFAA ATGVMPLDMP ESVLVRFKGK
MQPGVTLRDL VNAIPLYAIK SGLLTVEKKG KKNIFSGRIL EIEGLPDLKV EQAFELSDAS
AERSAAGCTV HLNKEPIIEY INSNITLMKW MIAEGYADAR TLARRIAAQE AWLADPQLLK
GDADADYAAV IEIDLADIHE PIVACPNDPD DVKTLSDVAG AQIDEVFIGS CMTNIGHFRA
ASKLLEGKRD IPVKLWIAPP TKMDAHQLTE EGHYGVFGNA GARTEMPGCS LCMGNQAQVR
EGATVMSTST RNFPNRLGKN TNVYLGSAEL AAICSRLGRI PTREEYMAAT GVLDASSAQI
YQYLNFDKID DYKTEAGAAV AA
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