| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1431 |
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| Symbol | |
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| ID | 7971259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1553437 |
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| End bp | 1554249 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792029 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002943348 |
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| Protein GI | 239814438 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATA TAAGATATGC TCCGGGGTTC CGCCACGGCG CACCCACCGC TGCCATGAAT
GCCCCCACCG TCCTCGAAGA TTCTGCGACG CCTTCCTTCA GTCCGCTCTA CCAGCAGATC
AAGACGCTGA TCCTGCAGAG CCTGCAGGCC GGCGAGTGGA AGCCGGGCGA GCCCATTCCC
AGCGAGATGG ACCTGGCGGT GCGCTTTCGC GTGAGCCAGG GCACGGTGCG CAAGGCCATC
GACGAACTCT CGGCCGAAAA CCTCGTGGTG CGGCGCCAGG GCAAGGGCAC CTTCGTCGCC
ACGCACGCCG AGCAGCATGT GCAATACCGC TTCCTCAAGC TGGTGCCCGA TGTCGGCACG
CCAAGCACCG AGGGTCCGGC CGAGCGCACC ATCGTCGACT GCCGCCGCCA GCGCGCCTCG
GCCGACGTGG CGCGCGCCCT GGGCCTGCGC ACGGGCGACG CGGTGCTGCA GGTGCGACGC
GTGCTCGCCT ACGGCGGCGT CCCGACCATC CTCGAGGACC TCTGGCTTCC CGGCGCGCCC
TTCAAGGGCC TCACGGCCGA GCGGCTGCGC GCCTGGCCGG GCCCGATGTA CGCCATGTTC
GAAACCGAAT TCGGCGTGCG CATGGTGCGC GCCGAAGAAA AGATCCGCGC CGTGCTGCCC
GATGCCGAGC AGGCCGCGCT GCTCGACGTG CCGCTGCAGA TGCCGCTGCT CAGCGTGGAG
CGCCTGGCCC ACACCTACCA CGACACGCCG ATGGAACTGC GCCGCGGCCT CTACCGCACC
GACACGCACC ACTACCGCAA CCAGCTCGGC TGA
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| Protein sequence | MSYIRYAPGF RHGAPTAAMN APTVLEDSAT PSFSPLYQQI KTLILQSLQA GEWKPGEPIP
SEMDLAVRFR VSQGTVRKAI DELSAENLVV RRQGKGTFVA THAEQHVQYR FLKLVPDVGT
PSTEGPAERT IVDCRRQRAS ADVARALGLR TGDAVLQVRR VLAYGGVPTI LEDLWLPGAP
FKGLTAERLR AWPGPMYAMF ETEFGVRMVR AEEKIRAVLP DAEQAALLDV PLQMPLLSVE
RLAHTYHDTP MELRRGLYRT DTHHYRNQLG
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