Gene Vapar_1412 details

Gene Information

• Locus tag: Vapar_1412
• ID: 7971240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1533977
• End bp: 1534537
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644792010
• Product: protein of unknown function YGGT
• Protein accession: YP_002943329
• Protein GI: 239814419

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTACC AGATCCCCTC GTTCCTTCTC GACGTGATCG TCGGCCTGCT CGGCGGCGCC 
TGCCTGCTGC GCCTCTACAT GCAGTACCAC CGCGTGCCTT TCGGCAATCC GCTCGGGCGC 
TTCATATTCG CGATCACCGA CTGGATCGTG CTGCCGCTGC GCCGCATCGT GCCGCCGGTG 
AAGCGCTGGG ACCTGGCGAG CGCCATCGCG GCGTGGCTGC TCGTGCTGGC CAAGTTCCTG 
CTGCTGTGGC TCCTGATCGG CAACCTGGGC CGGATTGCCA CCCTGCCGCT CGTTTCGCTG 
GTGGGGCTGC TGCAGCTCGC GGTGTCGGGG CTGACGGCGC TGCTGGTGGT CTACGCCGTG 
CTGTCGTGGA TACCGGGCGC GTCGCCGATG CTGCTCGACC TGATCTCGCG GCTGGCCGAG 
CCGCTGGTGC GGCCGTTCCG CCGGTTCATT CCGCTGATCG GCGGCGTGGA CCTGTCGCCC 
CTGGCCGCGA TCGTGGTGCT GCAGGTGATT GCGATCGTGC TGGGCAACCT GCTGGTGCTG 
GCTTACCAGC TGGGTGCCTG A 

 

Protein sequence

MLYQIPSFLL DVIVGLLGGA CLLRLYMQYH RVPFGNPLGR FIFAITDWIV LPLRRIVPPV 
KRWDLASAIA AWLLVLAKFL LLWLLIGNLG RIATLPLVSL VGLLQLAVSG LTALLVVYAV 
LSWIPGASPM LLDLISRLAE PLVRPFRRFI PLIGGVDLSP LAAIVVLQVI AIVLGNLLVL 
AYQLGA