| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1408 |
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| Symbol | |
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| ID | 7971236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1529794 |
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| End bp | 1530327 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792006 |
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| Product | protein of unknown function DUF45 |
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| Protein accession | YP_002943325 |
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| Protein GI | 239814415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1451] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATC TCGCGGGCTA CCCATCCGCG CTGCTGGCGC AGGTCCAGCA GCTGGTCGCC
ACCGAAGGGC TCGCGCCTCT GCTGCGCAAG CGCTATCCGG GACCGCTTCA CGAGGTGCAG
ACGGACCGTG CGCTCTACGA CTACGTGAGC GAACTCAAGA GCGATTTCAT GCGCAAAGCC
CCGCCGCTGT CCAAGGTGGC GTTCGACAGC AAGCTGCATG TGATCCGCAA TGCGCTCGGC
ACCCACACCA CCGTTTCGCG CGTGCAGGGC AGCAAGCTCA AGACCAAGCG CGAGATCCGG
GTGGCGAGCC TGTTCAGGGA AGTGCCGCTG GAATGGCTGC GCATGATCGT GGTCCACGAG
CTCGCGCACA TGAGAGAGCG CGACCATGAC AAGAGCTTCT ATGCGCTCTG CGAGCACATG
GAGCCGGACT ACCACCGGCT CGAATTCGAT GTCCGGCTGT ACCTGACGCA CCTGGATTCG
GGCGGCGAGC GGCTGTGGGC AAGTTCGCTG CCGGCGCCGG GCGCCGCGCC GTAG
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| Protein sequence | MKYLAGYPSA LLAQVQQLVA TEGLAPLLRK RYPGPLHEVQ TDRALYDYVS ELKSDFMRKA
PPLSKVAFDS KLHVIRNALG THTTVSRVQG SKLKTKREIR VASLFREVPL EWLRMIVVHE
LAHMRERDHD KSFYALCEHM EPDYHRLEFD VRLYLTHLDS GGERLWASSL PAPGAAP
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