Gene Vapar_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1406 
SymbolacpS 
ID7971234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1528291 
End bp1528683 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID644792004 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_002943323 
Protein GI239814413 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTACG GCATTGGTAC CGACATCTGC GATCTGCGGC GCATCGCAGC AACCTTCGAG 
CGCCAAGGCG AGCGCTTTGC CCACCGGGTG CTGAGCGACG CCGAATTCGC GGTCTGGAAG 
GCCCGCAGCG AACGCTGGCC CAAGCGCGGC CTGAGCTATC TCGCCACGCG TTTTTCCGCC 
AAGGAGGCCT TCAGCAAGGC CATCGGCCTT GGCATGCGCA TGCCGATGAG CTGGCGCCTG 
TGCGAAATCG CCAACCTGCG CAGCGGCAAG CCCGTCATCG TGCTGCATGG CGAGCTCAAG 
GAGTGGTTCG AGGCCCGCGG CCTCACGGCC CACGTCACCG TGACCGACGA AACCGAATAT 
GCCGCGAGCT TCGTGGTGGT GGAGAAACTA TGA
 
Protein sequence
MIYGIGTDIC DLRRIAATFE RQGERFAHRV LSDAEFAVWK ARSERWPKRG LSYLATRFSA 
KEAFSKAIGL GMRMPMSWRL CEIANLRSGK PVIVLHGELK EWFEARGLTA HVTVTDETEY 
AASFVVVEKL