| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1400 |
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| Symbol | |
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| ID | 7971228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1523699 |
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| End bp | 1524664 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791998 |
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| Product | signal peptidase I |
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| Protein accession | YP_002943317 |
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| Protein GI | 239814407 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA TCACTTCCCT GGTCCTCGCG GCCTTTGCCG GCTATGTCGG TGCCTGGTAC
TTTGGTGCCA TCGAGGGCAA TTTCGCGCTC CTGCTGTTCC TGGCGACGGT GGTCACCGGC
CTGTACTGGC TGGCCGAGCG CTTCTACTTC CTGCCCCGGC GCGAGCGCGC CGCCGCGGCG
CTCGAGGCCT CGCTGAGCGA GCGCAACGCG CGCCTGGCCG GCCAGGGCAT CACGCAGGTC
GACACCGTCG ACGCCAAGGC CAGCGAGCGC CTGCTGATGC AGCCGTGGTG GCTCGACTGG
ACCGCGGGGC TGTTCCCGGT GATCCTGGTG GTGTTCCTGC TGCGCTCGTT CCTGTACGAG
CCCTTCAAGA TTCCGTCGGG TTCGATGATG CCGACGCTGC TCACGGGCGA CCTGATCCTG
GTGAACAAGT TCACCTACGG TCTGCGCCTG CCGGTCATCA ACACCAAGAT CACCGACGGC
ACGCCGCTGG CGCGCGGCGA CGTGGTGGTG TTCCGCTATC CGCCCAAGCC GAGCATGGAC
TACATCAAGC GCGTGGTCGG CATCCCGGGC GACGAAGTGG CCTACCTGAA CAAGAAGCTC
ACCATCAACG GCCAGCCGGT CTCCAAGACC CCGATGCCCG ACTACCTCGA CAGCGAGTCG
ATGCGCCTGC TCCGGCAGTT CAACGAAGAC CTCGGCGGCA AGCAGCACAG GCTGCTCAAC
GACGATGCCG GTCCGGCTTT CGTCCAGGGT GCCAGCGACT TCCCGTACCG CGAGAACTGC
CGCTACTCCG TCGAAGGCGT GGTCTGCAAG GTGCCGGCCG GCAACTACTT CATGATGGGC
GACAACCGCG ATAATTCGGC GGACTCGCGT TTCTGGGGCT TCGTTCCGGA CAAGAACATC
GTGGGCAGGG CGTTCTTCGT CTGGATGAAC TTCGGCGACC TGGGTCGCAT CGGTCCATTC
CAATAA
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| Protein sequence | MAFITSLVLA AFAGYVGAWY FGAIEGNFAL LLFLATVVTG LYWLAERFYF LPRRERAAAA
LEASLSERNA RLAGQGITQV DTVDAKASER LLMQPWWLDW TAGLFPVILV VFLLRSFLYE
PFKIPSGSMM PTLLTGDLIL VNKFTYGLRL PVINTKITDG TPLARGDVVV FRYPPKPSMD
YIKRVVGIPG DEVAYLNKKL TINGQPVSKT PMPDYLDSES MRLLRQFNED LGGKQHRLLN
DDAGPAFVQG ASDFPYRENC RYSVEGVVCK VPAGNYFMMG DNRDNSADSR FWGFVPDKNI
VGRAFFVWMN FGDLGRIGPF Q
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