| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1393 |
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| Symbol | |
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| ID | 7971221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1515564 |
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| End bp | 1516808 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791991 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
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| Protein accession | YP_002943310 |
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| Protein GI | 239814400 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAC GCCGCGTCGT CGTGACCGGA CTCGGTTGCA TCGCTCCTGT CGGAAACACC
GCAGCCGAAT CCTGGGCCAA TCTGCTGGCC GGGAAGTCGG GCATTGCGAA CATCACCGCG
TTCGATGCAA GCGCCTTCGC CTGCAAGTTC GCCGGTGAGG TCAAGGGTTT CGACATCACC
CAATACATCT CGGAGAAGGA AGCGCGCCAC ATGGACCGCT TCATTCATCT GGGGCTTGCC
GCCGCCATCC AGGCGGTGCA GGACAGCGGA CTGCCGACCG GCGAAGCGCT GTCCTATGAA
GAGGCCGTGC GCATCGGCTG CAACATCGGC TCGGGCATCG GCGGCCTGCC GATGATCGAA
GAGACGCACG GCGAATACGC GAGTCGCGGC CCACGCCGCA TCTCGCCGTT CTTCGTGCCG
GCTTCCATCA TCAACATGAT CTCGGGCCAC GTCTCGATCA AGTACGGCTT CAAGGGCCCG
AACATCGCCG TCGTGACCGC CTGCACCACG GGCCTGCACG CCATCGGCAC GTCGGCGCGC
ATGATCGAAT ACGGCGACGC CGACGTCATG ATCGCGGGCG GCGCCGAGTC GACCATTTCT
CCGCTCGGCA TCGGCGGCTT CACCGCGCCC CGCGCGCTGA GCACCCGCAA CGACGATCCC
GCCACGGCCT CGCGTCCGTG GGACAAGGAC CGCGACGGCT TCGTGCTGGG CGAGGGCTCC
GGCGTGCTGG TGCTCGAAGA GTACGAACAC GCCAAGGCGC GCGGCGCCAA GATCTATGCG
GAAGTCTCGG GCTTTGGCAT GACCGGCGAC GCGTACCACA TGACCGCGCC CGACGTCGAC
GGCCCGCGCC GTTCGATGGC CATGGCGTTG GCCAATGCGG GCGTCAACCC CGACGAGGTC
CAGTACCTGA ATGCGCACGG CACCTCCACG CAGATCGGCG ACGTCAACGA GACCAATGCG
GTCAAGCTGG CTTTCGGCGA TCACGCGAAG AAGCTCGTCG TCAACTCGAC CAAGTCGATG
ACCGGCCACC TGCTGGGCGG CGCCGGCGGC ATCGAATCGG TGTTCACGGT GCTCGCGCTG
CATCACCAGA AGAGCCCGCC GACCATCAAC ATCTTCAACC AGGACCCGGA GTGCGACCTC
GACTATTGCG CCAATCAGGC GCGCGATCTG AAGATCGATG TCGCGGTCAA GAACAACTTC
GGCTTCGGCG GCACCAACGG CACGCTGGTG TTCAAGCGCG TTTGA
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| Protein sequence | MTKRRVVVTG LGCIAPVGNT AAESWANLLA GKSGIANITA FDASAFACKF AGEVKGFDIT
QYISEKEARH MDRFIHLGLA AAIQAVQDSG LPTGEALSYE EAVRIGCNIG SGIGGLPMIE
ETHGEYASRG PRRISPFFVP ASIINMISGH VSIKYGFKGP NIAVVTACTT GLHAIGTSAR
MIEYGDADVM IAGGAESTIS PLGIGGFTAP RALSTRNDDP ATASRPWDKD RDGFVLGEGS
GVLVLEEYEH AKARGAKIYA EVSGFGMTGD AYHMTAPDVD GPRRSMAMAL ANAGVNPDEV
QYLNAHGTST QIGDVNETNA VKLAFGDHAK KLVVNSTKSM TGHLLGGAGG IESVFTVLAL
HHQKSPPTIN IFNQDPECDL DYCANQARDL KIDVAVKNNF GFGGTNGTLV FKRV
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