| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1390 |
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| Symbol | |
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| ID | 7971218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1513406 |
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| End bp | 1514359 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791988 |
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| Product | malonyl CoA-acyl carrier protein transacylase |
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| Protein accession | YP_002943307 |
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| Protein GI | 239814397 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCT TTGCTTTTGT CTTCCCGGGC CAGGGCTCCC AGGCCGTCGG CATGCTCGAT
GCGTGGGGCG ATCACCCGGC CGTGGCCGAA ACCCTGCGCG AAGCCTCCGA AGCGCTGGGC
GAAGACATCG GCGGGCTGAT CAAGAACGGC CCGAAGGAAG AACTGGCGCT GACCACCAAC
ACCCAGCCGG TGATGCTGGT GGCCGGCGTG GCCGCCTGGC GCGCCTGGCT GGCCGAAGGC
GGGCCCACCC CGTCGGTGGT GGCGGGACAT TCGCTCGGTG AATATTCGGC GCTGGTTGCG
TCCGGCGTGC TGACGCTCGC GCAGGCCGCG CCACTGGTGC GTTTTCGCGC CCGGGCCATG
CAGCAGGCCG TGCCGGTCGG CGTCGGCGCC ATGGCGGCGG TGCTGGGCAT GGAAGCCGCC
AAGGTGGTGG CGGGCTGCGC GGAAGCCACG GCGTCCTTCG GTGCAGGCAG CGCCGAAATC
GTCGAGGCGG TGAATTTCAA CGATCCGATG CAGACCGTGA TCGCCGGCAG CAAGGCGGCC
GTCGACAAGG CCTGCGAGCT GCTCAAGGCC AGTGGTGCCA AGCGCGCGTT GCTGCTGCCG
GTCTCGGCGC CATTCCATTC AAGCCTGATG AAGCCGGCCG CCGAGGCGCT GCGCGAAAAG
CTCGCCACCC TCACATTGGC GCCCCCGCAG ATTCCGGTGC TGAACAACAT CGACGTGGCG
GTCGAGACCG ATCCCGCGCG CATCCGCGAC GCCCTGGTGC GCCAGGCCGC CGGCCCGGTT
CGCTGGGTCG AAAGCGTGCA GGCCTTGAAA CTGCGCGGCG TAGCCTCCAT CATCGAGTGC
GGGCCGGGCA AGGTGCTGGC CGGCATGGTC AAGCGCATCG CCCCCGAGCT GGAAGCCGCG
TCGGTGTACG ACCCGGCAAC GCTCGCGGAC ACCCGACAAT CGCTCGCCGG CTGA
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| Protein sequence | MKSFAFVFPG QGSQAVGMLD AWGDHPAVAE TLREASEALG EDIGGLIKNG PKEELALTTN
TQPVMLVAGV AAWRAWLAEG GPTPSVVAGH SLGEYSALVA SGVLTLAQAA PLVRFRARAM
QQAVPVGVGA MAAVLGMEAA KVVAGCAEAT ASFGAGSAEI VEAVNFNDPM QTVIAGSKAA
VDKACELLKA SGAKRALLLP VSAPFHSSLM KPAAEALREK LATLTLAPPQ IPVLNNIDVA
VETDPARIRD ALVRQAAGPV RWVESVQALK LRGVASIIEC GPGKVLAGMV KRIAPELEAA
SVYDPATLAD TRQSLAG
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