Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1389 |
Symbol | |
ID | 7971217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1512376 |
End bp | 1513353 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791987 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_002943306 |
Protein GI | 239814396 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCTT ATTCACGCAT CACCGGCACC GGCAGCTACC TGCCGCCGCG CCGGGTGACC AATGACGACC TTGCCAAGGA ATTGGCAACG CGCGGCATCG AAACCTCGGA CCAGTGGATC GTCGAGCGCA CCGGCATCCA CGCGCGGCAC TTCGCGGCGC CCGAGGTCAC GAGCAGCGAT CTCGCCCTCG AGGCCGCGAG GCACGCACTC GAAGCCGCGG GCCGCAAGGC CGAAGACATC GACCTGATCA TCGTCGCGAC CTCGACGCCG GACATGGTGT TTCCGTCGTC GGCGGCCATT CTCCAGAACA AGCTCGGCGT GGCCGGCTGC CCGGCTTTCG ACGTCCAGGC GGTCTGCAGC GGCTTCGTCT ATGCGCTGAC CGTGGCCGAC GCGATGATCC GCACCGGCAC CGCGCGCTGC GCGCTGGTGG TGGGCGCCGA AGTGTTCTCG CGCATCCTCG ATTTCAACGA CCGCACCACC TGCGTGCTGT TCGGCGACGG CGCCGGCGCC GTGGTGCTCG AGGCCAGCGA GGAGCCGGGC ATCCTGGCGA GCGACCTGCA CGCGGACGGC AAGCACGTCG GCATCCTTTG CGTGCCGGGC CACGTCTCCG GCGGCAACGT GCTGGGCACG CCGCTGCTGC ACATGGACGG ACAGGCCGTG TTCAAGCTCG CGGTGCGCGT GCTCGAGGAC GCCGCGCGTG CCACGCTCGC AAAGGCGGGC AAGACCGAGG CCGACATCGA CTGGCTCATT CCGCACCAGG CCAACATCCG CATCATGGAA GGCACGGCCA AGAAGCTGAA GCTTCCGCGC GAAAAGCTCA TCGTCACCGT CAACGAGCAT GGCAACACCT CGGCCGCCTC GATTCCGCTG GCGCTCGACG AGGCCGTGCG GTCCGGCAAG GTGAAGAAGG GCGAAACCGT CATGCTGGAA GGCGTGGGCG GCGGCTTCAC CTGGGGCGCG GTGCTATTGA ATCTGTAG
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Protein sequence | MSSYSRITGT GSYLPPRRVT NDDLAKELAT RGIETSDQWI VERTGIHARH FAAPEVTSSD LALEAARHAL EAAGRKAEDI DLIIVATSTP DMVFPSSAAI LQNKLGVAGC PAFDVQAVCS GFVYALTVAD AMIRTGTARC ALVVGAEVFS RILDFNDRTT CVLFGDGAGA VVLEASEEPG ILASDLHADG KHVGILCVPG HVSGGNVLGT PLLHMDGQAV FKLAVRVLED AARATLAKAG KTEADIDWLI PHQANIRIME GTAKKLKLPR EKLIVTVNEH GNTSAASIPL ALDEAVRSGK VKKGETVMLE GVGGGFTWGA VLLNL
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