Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1387 |
Symbol | rpmF |
ID | 7971215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1511035 |
End bp | 1511217 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644791985 |
Product | 50S ribosomal protein L32 |
Protein accession | YP_002943304 |
Protein GI | 239814394 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0333] Ribosomal protein L32 |
TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTCC AGCAAAACAA GAAGTCGCCT TCCAAGCGCG GCATGCACCG TTCCCACAAT GCGCTGGTCG TGCCCGGCAT TGCCGTTGAG CCGACCACTG GCGAAACGCA CCTGCGCCAC CACATCAGCC CCAACGGTTT CTACCGTGGC CGCCAGGTGC TCAAGAACAA GTCCGAAGCC TGA
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Protein sequence | MAVQQNKKSP SKRGMHRSHN ALVVPGIAVE PTTGETHLRH HISPNGFYRG RQVLKNKSEA
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