| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1365 |
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| Symbol | |
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| ID | 7973046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1485549 |
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| End bp | 1486697 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791963 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943282 |
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| Protein GI | 239814372 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3503] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCC GCGCCCGGCT GCTTTCCATC GATGCCCTGC GCGGCCTCGT GATCCTGTTC
ATGCTGCTGG ACCACGTGCG CGAGACTTTC TACCTGCACC ACCAGGTGCC CGACCCGATG
GTCGCGGCCG AAACGCCGCC CGAGCTGTTC TTCAGCCGCC TGCTGGCCCA CCTGTGCGCG
CCGGTGTTCG TGTTCCTGAC CGGGCTGTCG GCCTTTCTCT ATGCCGCGAA GCAGCCCGGC
GGCCGCACGG CGGCTTCCTC CTTCCTGTGG AAGCGGGGCC TGTTCCTCGT GCTGCTGGAG
GTCACGGTCA TCAACTTCGC ATGGACCTTC CAGTTTCCGC CGGCCAAGGT GTTCCTGCAG
GTGATCTGGA TCATCGGCCT GTCGATGCTG GCGCTGGCGG CGCTGGTATG GCTGCCGCGC
AAGGTGCTCA TCGTGCTGGG CATCGTGCTG GTCGCGGGGC ACAACCTGCT CGACGGCCTG
CACTTTCCCG TGGGCCATGC ACTGCACGTG CCCTGGGCCA TCCTGCATGA CCGGGGCTGG
ATCGAACTGC CCGGTGCTGC ACTGAAGCTG CGCACCTCCT ATCCGCTGCT TCCATGGATC
GGCGTGATCG CGCTGGGCTA CGCCGCCGGG CCATGGTTCG CGGCCGGCGC CGATGCCGCG
CAGCGCCAGC GGCGGCAGCT GGGCTGGGGC GCGGGGCTGC TGGCCGGCTT CGTGCTGCTG
CGGCTGCTCG ACGTGTATGG CGACAAGCCC TGGACGGCCG GCGACACCGC CCTGGCCAGC
TGGATGGGCT TTCTCAACAT CACCAAGTAC CCGCCCTCGC TGCTGTTCAT TGCGCTGACG
CTCGGCATCG GCCTGCTGCT GCTGCGCGCG TTCGAGCGCC GGCAGGGTGC GGCATGGCTG
GCGCCGCTGG CCGTGTTCGG TGCCGCGCCC ATGTTCTTCT ACGTGCTGCA CCTGTACGTG
CTCAAGTTCC TCTATCTCGG CGCCGAAGCG GCCTGGGGCC GGAACCACGG GGCGCTCTTC
GGTTTCGATG CGATGTGGAT GGTGTGGGCC GCCGCGGCCG TGCTGGCCGT TGCGCTGTAC
CCCGCGGTGC GCGCCTTCGC CGGCCTGAAG GCGCGGCGCC GCGACATCGC CTGGCTCAAG
TACCTGTGA
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| Protein sequence | MPARARLLSI DALRGLVILF MLLDHVRETF YLHHQVPDPM VAAETPPELF FSRLLAHLCA
PVFVFLTGLS AFLYAAKQPG GRTAASSFLW KRGLFLVLLE VTVINFAWTF QFPPAKVFLQ
VIWIIGLSML ALAALVWLPR KVLIVLGIVL VAGHNLLDGL HFPVGHALHV PWAILHDRGW
IELPGAALKL RTSYPLLPWI GVIALGYAAG PWFAAGADAA QRQRRQLGWG AGLLAGFVLL
RLLDVYGDKP WTAGDTALAS WMGFLNITKY PPSLLFIALT LGIGLLLLRA FERRQGAAWL
APLAVFGAAP MFFYVLHLYV LKFLYLGAEA AWGRNHGALF GFDAMWMVWA AAAVLAVALY
PAVRAFAGLK ARRRDIAWLK YL
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