Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1311 |
Symbol | |
ID | 7972992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1427144 |
End bp | 1428508 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791909 |
Product | MmgE/PrpD family protein |
Protein accession | YP_002943228 |
Protein GI | 239814318 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCT CATCGAATCA TCCCAGCCGG GATCTCGCCA CCTTCGCCGC CGAACTCAAG TTAGCGGACA TTCCCGCCCC CGTGCTGCGC CGCACCGAGG ACCTGATGCT CGACTGGCTG GGCTCGGTGC TCGCGGCGCG CACGGCGCGG CCGGTACGCA GCATCGAGCG CTTCGCCCAG ACGATGGGGC CGGCCGAGGG GCCGAGCGAA ATGCTCACCT CGCGCCGCAC CACTTCGCCA GTGTTCGCCG CGCTCGTCAA CGCCGCGGCC TCGCACTACG TGGAGCAGGA CGATGTGCAC AACGGCTCGG TGTTCCATCC CGCGGCCGTG GTCATCGCGC CCGCGCTGGC CGTGGCGCAG AGCATCGGGG CCAGCGGTGC GCAGCTGCTG ACGGCGGTGG TGGCCGGCTA CGAGGTCGGC ATCCGCGTCG GCGAGTTCCT CGGGCGCTCG CACTACAAGA CCTTCCACAC CACCGCGACG GCGGGCACGC TCGCAGCGGC TGCCGCCGTG GGCCGACTGC TCGAACTCAC GCCGCAGCAG ATGCTGCATG CCTTCGGCTC GGCCGGCACG CAGTCGGCGG GCGTGTGGGA ATTCCTGCGC GATGCGGCCG ATTCGAAGCA GCTGCACTGC GCGCATGCGG CCGCCAGCGG ACTGATGTCG GCCTACCTCG CGCAGGACGG CTTCACGGGC GCGGCGAAAG TGCTCGAAGG CGCGCAGGGC CTGGGCGTGG GCATGTCGAG CGATGCCGAT CCGGCACGGC TCACCGACCG CCTCGGCACG CGCTGGGCGC TGGCCGAAAC CTCGTTCAAG TACCACGCCT CCTGCCGCCA CACGCATCCC GCGGCCGATG CGCTGCTGCA GGTGATGAGC GAGCACCAGC TCGCGCACGG CGACGTGGCC CACGTGACCG CGCACGTGCA CCAGGGCGCC ATCGACGTGC TGGGCCGCGT CACGGTGCCA GCCACCGTGC ACCAGGGCAA GTTCTCGATG GGCACGGTGC TGGGCCTGAT CGCGGTGCAC GGCCGCGCCG GCCTGGGCGA ATTCGACCGC GACTTTCTGG CGCCCGAGGT GGCCGCGTTC CGCGACAAGG TGGCGATGCA GCTCGACGCC GAGGTCGACA CCGCCTACCC CGCGCGCTGG ATCGGCAAGG TCAGCGTGCA GACCCGCGAC GGCCGCACGC TGGCCGGGCG CGTCGACGAG CCCAAGGGCG ACCCGGGCAA CAGCCTGAGC CGCACGGAAA TCGAGGACAA GATGCAGCGC CTCGCGCACT ACGGCGAGGG CGCCACGGCC GACGAGGCGA AGGCGCTGTG CCAACGCATC TGGCAGCTCG AGTCTGCGCC GCGCGTGGGC CGCTGGCTCG GCTGA
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Protein sequence | MTTSSNHPSR DLATFAAELK LADIPAPVLR RTEDLMLDWL GSVLAARTAR PVRSIERFAQ TMGPAEGPSE MLTSRRTTSP VFAALVNAAA SHYVEQDDVH NGSVFHPAAV VIAPALAVAQ SIGASGAQLL TAVVAGYEVG IRVGEFLGRS HYKTFHTTAT AGTLAAAAAV GRLLELTPQQ MLHAFGSAGT QSAGVWEFLR DAADSKQLHC AHAAASGLMS AYLAQDGFTG AAKVLEGAQG LGVGMSSDAD PARLTDRLGT RWALAETSFK YHASCRHTHP AADALLQVMS EHQLAHGDVA HVTAHVHQGA IDVLGRVTVP ATVHQGKFSM GTVLGLIAVH GRAGLGEFDR DFLAPEVAAF RDKVAMQLDA EVDTAYPARW IGKVSVQTRD GRTLAGRVDE PKGDPGNSLS RTEIEDKMQR LAHYGEGATA DEAKALCQRI WQLESAPRVG RWLG
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