| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1293 |
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| Symbol | |
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| ID | 7973217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1409061 |
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| End bp | 1410125 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791890 |
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| Product | CDP-6-deoxy-delta-3,4-glucoseen reductase |
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| Protein accession | YP_002943210 |
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| Protein GI | 239814300 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTG CAGCGCCGCA TGAAGCGGGC TTTTCCATCA CCGTCGAGCC CAGCGGGCGT
CATTTCGTGG TGCATGGCGA CGAAACCATT CTCGCGGCCG GCATCCGCCA GGGCATCGGC
CTTCCCTATG GCTGCAAGGA TGGCGCCTGC GGCTCGTGCA AGTGCCGGAA GCTCTCGGGC
GAGGTCGAGC TCGGGCCGCA CCAGAGCAAG GCGCTGAGCG CCGAAGAGCA GCTGGCGGGC
TTCGTGCTGA CCTGCTGCGC CCATGCCAAG AGCGACGTGG TGCTCGAATC GCGCCAGGTC
ACCGAGGCCG GCGCCCTGCC GATCCGCAAG ATGCCGGTGC GGGTGCTGGC GCTCACGCGG
CTCTCCCACG ACGTGATGAA GCTGCGCCTG CAGCTGCCGG CCGGCGAGCC GCTGCAGTTT
CATGCGGGCC AGTATGTGGA ATTCATCCTG CGCGACGGCG CGCGCCGCAG CTACTCGATG
GCCAATGCGC CGCACACGCT GGCCGAACCG GGCACGGGCA TCGAGCTGCA CCTGCGGCAT
CTGCCGGGCG GCAAGTTCAC CGACCATGTG TTCGGCGCCA TGAAGGAAAA GGAAATCCTT
CGCATCGAAG GCCCCTACGG CAGCTTCTTC CTGCGCGAGG ATTCGGCCAA GCCGATGATC
CTGCTGGCTT CGGGCACCGG CTTTGCGCCC ATCAAGGCGC TGCTCGAGCA CATGAAGTTC
AAGCGCATCG ACCGGCCCGC CACGCTCTAC TGGGGCGGCC GCCGGCCCGA AGACCTCTAC
ATGGACGCCT GGGTGCGCGA GCAGCAGAAG GAGATGCCGA ACCTGCGCTA CGTGCCGGTG
GTTTCCAACG CCACGCCGGA AGACAACTGG AACGGCCGCA CGGGCTTCGT GCATCGCGCG
GTGCTGGAGG ACTTTGCCGA CCTTTCGGGC CACCAGGTGT ATGCCTGCGG CGCGCCGATC
GTGGTCGACT CGGCCCGGCA CGACTACGTG GCGCTGGCCG GCCTGCCCGA CGAAGAATTC
TTTGCCGACG CGTTCACCAC CGAGGCCGAC AAGGCGCTTC CCTGA
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| Protein sequence | MTVAAPHEAG FSITVEPSGR HFVVHGDETI LAAGIRQGIG LPYGCKDGAC GSCKCRKLSG
EVELGPHQSK ALSAEEQLAG FVLTCCAHAK SDVVLESRQV TEAGALPIRK MPVRVLALTR
LSHDVMKLRL QLPAGEPLQF HAGQYVEFIL RDGARRSYSM ANAPHTLAEP GTGIELHLRH
LPGGKFTDHV FGAMKEKEIL RIEGPYGSFF LREDSAKPMI LLASGTGFAP IKALLEHMKF
KRIDRPATLY WGGRRPEDLY MDAWVREQQK EMPNLRYVPV VSNATPEDNW NGRTGFVHRA
VLEDFADLSG HQVYACGAPI VVDSARHDYV ALAGLPDEEF FADAFTTEAD KALP
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