| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1278 |
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| Symbol | |
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| ID | 7973202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1392387 |
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| End bp | 1394240 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791875 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_002943195 |
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| Protein GI | 239814285 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.589053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCG CTGATTTTGT TCACCTCGTC AGGCTGAGCG AGCATGCCAG CGCGGACGAC
AGCGCGCGCT ACCGGCGCGG CGTCGCGGCT TTTGCGGCGC TCGGCTATCT CTGGGTGCTG
GCTTGCCTTG CGCTTTCGGT CGGCATCATC GCCTGGGTCG CGCTGGCGGC CGGACGCGGG
CGTTTCAGCT TCACGCGCGG CTGGCTGCTG CTGTTCGCCC TGGGCCTGCT CTGGGCCACG
CTGCGCGCGC TCTGGGTCCG GTTCGACGAG CCTGAAGGGC GCGAGCTTTC GCGCGCCGAT
GCGCCCGCGC TGTTCGAGGC GCTCGAGCGC ATCCGCAAGA AGATCAAGGG GCCGCCGGTC
CACCGCGTCT ATCTCGACGA CGAGTTCAAT GCCAGCATCC GGCAGGTACC GCGCTTCGGG
CTGTTCGGCG GGGCGGTCAA CTCCCTGAGC ATCGGGCTGC CGCTGCTCAT GATGCTGGAC
CGGCGGCGGC TGCTGTCGGT GCTCGCCCAT GAATACGGGC ACCTGCGCGG CAACCACGGC
AAGCTCAGTG CCTGGATCTA CCGCACGCGG CTTTCATGGC TGAAGCTGGA CGCCAGCCTG
CAGCGCGACG AAGGCGTGAT GGCGCTGGTG TCGCAAGCCT TCTTCCGCTG GTACTTTCCG
CGTTTCGCGG CCCGCACCTT CGCGCTTGCG CGGCAGGACG AATACGAAGC CGACCGCATC
TCCGGCCGGC TGCTGGGCAC GCCCGTGGCC GCGGCCGCCT TGACCGAGAT CGCCATCAAG
GCCCGCTGGT ATGCCGACGA GTTCTGGGCC TCGCACTGGG CGCGCGCCGA ACGCGAGCCG
CAGCCGCCCG GTCCCTTCGA GGCCCTGAGC CAGCGCGCCG CCACGCCGCC GGACGCCGAA
TTCGCGCGCC AGGCCCTGCG CGAAGCCATG CGGCGCGTGA GCGACCTGGA AGACACCCAT
CCCGTGCTGC GCGACCGGCT CGAGGCGCTC GGCCAGAAGG CCGTGGTGCC GCCCTGGTCG
GTCGAACCCG CGCTGGGCAT GCTGGCCGAC AGCGCCAAGT GGATCGCGCA TTTCGACAAC
CAGTGGCGCC GTGCCCATGC CGGCGACTGG AAGCAGCACC ACGCGCATCG CTCGCGCATC
CGCGAGCGCG TCGAGCTGCT CGCAGTGCGG GGCGAGCGCA ACACGCCCGA CGAGCTGGTG
GAGTGGGCGG ATGCCGAACG CCGGCTCGAT CCGGCCGCCC CGGTGCGTGC CCGCTATGAG
CGCGCACTCC AGATCGCGCC CGAGCACTCC GGCGCCCTGC GCGGACTGGC CCAGATGCTG
CCCCTGCGCG ACCGCGCGGC GCGCCTGGCG GTGCTCGAGC GCCTGTACGG CTCCAGCGCG
GCGAGCCGCT GGTGGGCCGC GAAAAGTGCC GTGGCCGCGC TCGAGGACCC CGATGCGGGC
GCGCACGACG AGGACGCGCT CAAGCTGTGG CGCGGCCGTC TCAAGGAGGC CGAGGAAGCC
GAGGCCCGCG CCTGGGAAGA GATCACCGAG ACGCCTTTCT TCAGCCAGAT CGCCCGGCAC
GACCTGGGCG ACCACGAACT GGGCGAACTG CGGGCCGACC TCGCGCGCTG CCTGCCCATC
TCGCGGGCCT GGCTGGTGCG CAAGATCCTG CGCGAATTCC CGTGGCGCCG GGCCTACGTC
GTGTTCGTCG AGTTGCCGGG GCTGGACGAC GACGACCGCT GGCAGCTCTG CCGCCAGCTC
GAACACACGC TGAGCCTGCC GGGCGCGGCG CTGGTGCTCT GGGCCGGCCA TTCGCCGACG
CTGGAGGAGA TCGAGCGGCA GGCTTTCGGG GCGATCTGGA CGCGCACCGC GTAG
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| Protein sequence | MDRADFVHLV RLSEHASADD SARYRRGVAA FAALGYLWVL ACLALSVGII AWVALAAGRG
RFSFTRGWLL LFALGLLWAT LRALWVRFDE PEGRELSRAD APALFEALER IRKKIKGPPV
HRVYLDDEFN ASIRQVPRFG LFGGAVNSLS IGLPLLMMLD RRRLLSVLAH EYGHLRGNHG
KLSAWIYRTR LSWLKLDASL QRDEGVMALV SQAFFRWYFP RFAARTFALA RQDEYEADRI
SGRLLGTPVA AAALTEIAIK ARWYADEFWA SHWARAEREP QPPGPFEALS QRAATPPDAE
FARQALREAM RRVSDLEDTH PVLRDRLEAL GQKAVVPPWS VEPALGMLAD SAKWIAHFDN
QWRRAHAGDW KQHHAHRSRI RERVELLAVR GERNTPDELV EWADAERRLD PAAPVRARYE
RALQIAPEHS GALRGLAQML PLRDRAARLA VLERLYGSSA ASRWWAAKSA VAALEDPDAG
AHDEDALKLW RGRLKEAEEA EARAWEEITE TPFFSQIARH DLGDHELGEL RADLARCLPI
SRAWLVRKIL REFPWRRAYV VFVELPGLDD DDRWQLCRQL EHTLSLPGAA LVLWAGHSPT
LEEIERQAFG AIWTRTA
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