| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1269 |
|---|
| Symbol | |
|---|
| ID | 7973193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 1384639 |
|---|
| End bp | 1385676 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644791866 |
|---|
| Product | bifunctional riboflavin kinase/FMN adenylyltransferase |
|---|
| Protein accession | YP_002943186 |
|---|
| Protein GI | 239814276 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0563072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTT TCCGCGGCTT CCGGCACCCG GGCGTGGCTC CGGCCTGCGC CCTCACCATC
GGCAATTTCG ACGGCGTGCA CCGTGGCCAC CAGGCCATGC TGGCGCTCTT GCAGACCGAG
GCGCGCCATC GCGGGCTGCC CAGCTGCGTG CTCACCTTCG AGCCGCATCC GCGCGACTAT
TTCGCCGCCG TCACCAAGAA ACCCGACCTG GCGCCCGCGC GCATCGGCAC GCTGCGCGAC
AAGCTCACCG AGCTCGCGGC CTGCGGCGTG GCGCAGACGG TGGTGCTGCC CTTCGACGGC
CGGCTGGCCT CCCAGTCGCC CGAAGCCTTC ATCCAGAACG TGCTGATCGA CGGCCTGGGC
GCGCGCTACG TGCTGGTGGG CGACGACTTC CGCTTTGGCG CCAGGCGGGC CGGCGACTAC
GCCATGCTCG ACGCCGCCGG CGATGCGCAC GGCTTCGACG TGGCGCGCAT GAACAGCTAC
GAGGTCCACG GCCTGCGCGT TTCCAGCTCG GCCGTGCGCG AGGCGCTGGC CGAGGGCCGC
ATGGCCGATG CCCAGCACCT GCTCGGGCGG CCCTACACGA TCTCGGGCCA CGTGGTCCAT
GGCCGCAAGC TCGGCCGCGC GCTGGGCGCC TCGGCGCCTG GCAAGGACGA CGGGTTCCGC
ACCCTCAACC TGCGCTTCAA GCACTGGAAA CCGGCGGCCA GCGGCATCTT CGCGGTACTG
GTGCACGGGC TGGCCGACCA GCCGCTGCCG GGCGTGGCGA ACCTCGGCGT GCGGCCCTCG
CTCGATGCCA ACGACGTCAA CGCGGGCCGC GTGCTGCTGG AGACGCATTG CCTGGAGTGG
CCCTCGCATC TGGGAGCCGA AGGGGCCTAC GGTAAAATCG TCCGCGTGGA ACTCCTGCAC
AAACTGCACG ACGAATTGCG CTACACCAGC CTCGAGGCCC TGACTGCGGG CATCGCGAAG
GATGGGCGCG ACGCGCGCGC ATTCTTTGCG TCGACCCACG CCGAAACCCA CCGCCAGACC
ACGCGCGACC GAATTTAG
|
|---|
| Protein sequence | MQVFRGFRHP GVAPACALTI GNFDGVHRGH QAMLALLQTE ARHRGLPSCV LTFEPHPRDY
FAAVTKKPDL APARIGTLRD KLTELAACGV AQTVVLPFDG RLASQSPEAF IQNVLIDGLG
ARYVLVGDDF RFGARRAGDY AMLDAAGDAH GFDVARMNSY EVHGLRVSSS AVREALAEGR
MADAQHLLGR PYTISGHVVH GRKLGRALGA SAPGKDDGFR TLNLRFKHWK PAASGIFAVL
VHGLADQPLP GVANLGVRPS LDANDVNAGR VLLETHCLEW PSHLGAEGAY GKIVRVELLH
KLHDELRYTS LEALTAGIAK DGRDARAFFA STHAETHRQT TRDRI
|
|---|
| |