| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1268 |
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| Symbol | |
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| ID | 7973192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1381667 |
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| End bp | 1384516 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791865 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_002943185 |
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| Protein GI | 239814275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0676836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG CCGCTTCCCC CACCGACTAC CGTTCCACGC TGAACCTGCC CGACACCCCC
TTCCCGATGC GCGGCGACCT GCCCAAGCGC GAACCGGGCT GGGTCAAGGA ATGGAACGAC
GAAGGCCGCT ACCAACGCCT GCGCGACGCC CGCCACGGCG CGCCCAAGTT CATCCTGCAC
GACGGCCCGC CCTACGCCAA CGGCCAGATC CACATGGGCC ACGCGGTGAA CAAGATCCTG
AAGGACATGA TCACCAAGGC GCGCCAGCTC GAAGGCTACG ACGCGCTCTA CGTGCCCGGC
TGGGACTGCC ACGGCCTGCC GATCGAGAAC GCCATCGAAA AGCAGTACGG CCGCAACCTG
AGCCGCGACG AGATGCAGGC CAAGAGCCGC GCCTACGCCA CGGAACAGAT CGCGCAGCAG
ATGGCCGACT TCCAGCGCCT GGGCGTGCTG GGCGAATGGG ACCATCCCTA CAAGACGATG
GACTTCGCGA ACGAAGCCGG CGAGCTGCGC GCGTTCAAGC GCGTGATCGA GCGCGGCTTC
GTCTACCGGG GCCTCAAACC GGTGTACTGG TGCTTCGACT GCGGCTCGTC GCTGGCTGAA
TTCGAAATCG AATACGCCGA CAAGAAGAGC CAGACCCTCG ACGTGGCCTT CAAGGCGCAC
GAGCGCGAGA AGGTGCTCAA GGCCTTCGGG ACCGACCACA CGATCCTCGG CGACATCTTT
GCCGTGATCT GGACCACCAC CGCGTGGACC ATCCCGGCCA ACCAGGCGAT CAACCTGAAC
CCCGAGATCG AATACTCGCT GGTCGACACC GAGCGCGGCC TCTTGATCCT GGCCAACTCG
CTGGTAGAGA TGTGCATGAC GCGCTATGCG CTCGACGGCA AGGTGCTGGC CACGGTCAAG
GGCGAAGCAC TTGGCGGGCT CGAATTCGAG CATCCGCTGT ACGACGTGGA CGCTGGCTAC
AAGCGCCTGT CGCCCGTGTA CCTGGCCGAC TACGCCACCG CCACCGACGG CACCGGCCTG
GTCCACTCCT CGCCCGCCTA CGGCGTGGAC GACTTCAACT CCTGCATCGC GCATGGCGTG
GCGTATGACG ACATCCTGAA CCCGGTGCAG GGCAATGGCA GCTACGCGCC CGACTTCCCG
CTGTTCGGCG GGCAGAACAT CTGGAAGGCC GTACCGGTCA TCATCGCGGC GCTGCGCGAT
GCCAACCGGC TGCTCACCAC CGAGACCATC ACGCACAGCT ATCCGCACTG CTGGCGCCAC
AAGACGCCGG TGATCTACCG CGCCGCGGCG CAGTGGTTCA TCCGCATGGA CGAGGGCGAA
GGCGTGTTCA CCAAGGACAA GGCGCCCAAG ACGCTGCGCC AGACCGCGCT CGACGCGATC
GAACAGACCA GCTTCTATCC GGAGAACGGC AAGGCGCGCC TGCACGACAT GATCGCCGGG
CGGCCCGACT GGTGCATCAG CCGCCAGCGC AGCTGGGGCG TGCCGATCCC GTTCTTCCTG
CACAAGGATT CGGGCGAGCT GCATCCGCGC ACGATGGAAA TCCTCGACCA GGCCGCCGAC
ATCGTCGAGA AGGGCGGCAT CGAGGCCTGG AGCCGCGTCA CGGCCGAAGA GATCCTGGGC
GCCGAAGATG CGCCGCACTA CACCAAGAGC ACCGACATCC TCGAGGTGTG GTTCGACTCG
GGCTCGACCT TCTATCACGT GCTGCGCGGC ACGCACCCCA ACGTGCACCA CGAGAGCGGC
CCCGAAGCCG ACCTGTACCT CGAAGGCCAT GACCAGCACC GCGGCTGGTT CCATTCGTCG
CTGTTGATCG CCTGCGCGCT GGAAGGCCGC GCGCCCTACC GCGGCCTGCT CACGCACGGC
TTCACGGTGG ATGCCAAGGG CATCAAGATG AGCAAGTCGC TCAAGAACGG CATCGACCCG
CAGGAAATCA GCAACAAGCT GGGCTCGGAA ATCATCCGCC TGTGGGTGGC CGCGAGCGAC
TACTCGGGCG ACATCGCGGG CGACGACAAG ATCCTCGCGC GCGTGGTCGA TGCCTACCGC
CGCATCCGCA ACACGCTGCG CTTCCTGCTG GCGAACACGA GCGACTTCGA CATCGCCAAG
GATGCCGTGC CGCTCGAGGA ACTGTTCGAG ATCGACCGTT ATGCGCTCTC GCGCGCGGCG
CAGTTCCAGG CCGAGATCCT TGCGCACTAC AAGGTGTACG AGTTCCATCC GGTGGTGGCC
AAGCTGCAGA TCTACTGCTC GGAAGACCTG GGCGGCTTCT ACCTCGACAT CCTGAAGGAC
CGGCTCTACA CGACCGCGCC GGGCTCGCTG GCGCGCCGCA GTGCGCAGAC GGCGCTCTGG
CACATCTCGC AGGCAATGCT GCGCTGGATG GCGCCGTTCC TGAGCTTCAC GGCCGAAGAG
GCATGGAAGT TCGTGAGCAC GGGCAAGCCG GGCGAGTCGA TCTTTGCGCA GACCTACAGC
CAGTTCGCCG CGCCCGACGA AGCACTGCTT GCGAAGTGGG GCCGCATCCG CGAGATCCGC
GACGTGGTCA ACAAGGACAT CGAAGCCGTG CGCGCCGAAG GCAAGGTCGG CTCGTCGCTG
CAGGCCAAGC TGCAGCTCAG CGCACCGGCC GACGACTTCG CGCTGCTGGA GTCGCTGGGC
AACGACCTGA AGTTCGTCTT CATCACTTCG GCGATCGAAC TGGCGGCGGG CGAAGCGCTG
TCTTCGGTGG TGACGCCGAG CACGGCGCAG AAGTGCGATC GCTGCTGGCA CTACCGCGAC
GACGTGGGCC ACGACCCGGC GCATCCGACG ATCTGCGGCC GTTGCACGAG CAACCTGTTC
GGTGCCGGCG AGCCGCGGAG CTTTGCCTGA
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| Protein sequence | MSDAASPTDY RSTLNLPDTP FPMRGDLPKR EPGWVKEWND EGRYQRLRDA RHGAPKFILH
DGPPYANGQI HMGHAVNKIL KDMITKARQL EGYDALYVPG WDCHGLPIEN AIEKQYGRNL
SRDEMQAKSR AYATEQIAQQ MADFQRLGVL GEWDHPYKTM DFANEAGELR AFKRVIERGF
VYRGLKPVYW CFDCGSSLAE FEIEYADKKS QTLDVAFKAH EREKVLKAFG TDHTILGDIF
AVIWTTTAWT IPANQAINLN PEIEYSLVDT ERGLLILANS LVEMCMTRYA LDGKVLATVK
GEALGGLEFE HPLYDVDAGY KRLSPVYLAD YATATDGTGL VHSSPAYGVD DFNSCIAHGV
AYDDILNPVQ GNGSYAPDFP LFGGQNIWKA VPVIIAALRD ANRLLTTETI THSYPHCWRH
KTPVIYRAAA QWFIRMDEGE GVFTKDKAPK TLRQTALDAI EQTSFYPENG KARLHDMIAG
RPDWCISRQR SWGVPIPFFL HKDSGELHPR TMEILDQAAD IVEKGGIEAW SRVTAEEILG
AEDAPHYTKS TDILEVWFDS GSTFYHVLRG THPNVHHESG PEADLYLEGH DQHRGWFHSS
LLIACALEGR APYRGLLTHG FTVDAKGIKM SKSLKNGIDP QEISNKLGSE IIRLWVAASD
YSGDIAGDDK ILARVVDAYR RIRNTLRFLL ANTSDFDIAK DAVPLEELFE IDRYALSRAA
QFQAEILAHY KVYEFHPVVA KLQIYCSEDL GGFYLDILKD RLYTTAPGSL ARRSAQTALW
HISQAMLRWM APFLSFTAEE AWKFVSTGKP GESIFAQTYS QFAAPDEALL AKWGRIREIR
DVVNKDIEAV RAEGKVGSSL QAKLQLSAPA DDFALLESLG NDLKFVFITS AIELAAGEAL
SSVVTPSTAQ KCDRCWHYRD DVGHDPAHPT ICGRCTSNLF GAGEPRSFA
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