| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1260 |
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| Symbol | |
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| ID | 7973184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1373292 |
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| End bp | 1374953 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791857 |
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| Product | Na/Pi-cotransporter II-related protein |
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| Protein accession | YP_002943177 |
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| Protein GI | 239814267 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1283] Na+/phosphate symporter |
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| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter
[TIGR01013] Phosphate:Na+ Symporter (PNaS) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.170885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACC TCCTGAACCT GCTCGCCGCC GTTGCCCTGC TGGTGTGGGG CACGCACCTC
GTGCGCACGG GCGTGCTGCG CGTGTTCGGC GCCAACCTGC GCAAGATCCT GGTGCAGAGC
ATGCGCAACC GCTTCACGGC CGCGCTGTCG GGCATCGGCG TCACGGCCCT GGTGCAGTCG
AGCACCGCCA CCTCGCTGAT GACCTCCTCC TTCGTGGGGC AGGGCCTGGT CACGCTGCCG
GCAGCGCTGG CGGTGATGCG CGGGGCCGAC GTGGGCACGG CGCTCATCTC GGTGCTGTTC
TCGGCCGATC TCTCGTGGCT GTCGCCGATG TTCATCTTCG TGGGGGTGGT GCTGTTCATC
ACCCGCTCGG CCAGCGTGGC GGGCCGCGTG GGGCGGGTGC TGATCGGCCT GGGGCTGATG
CTGCTGGCGC TGCAGCTGGT GGTGGAAGCG ACCGAGCCTC TCTTTTCGGC GCCGGCCGTG
CGCGTGCTGC TGGCCTCGCT CAACAGCGAC GTGCTGCTCG AGATCACCAT CGGCGCGGCG
CTGGCGATCG TGGCCTATTC GAGCCTGGCG GTGGTGCTGC TGGTGGCGGC CATGGCCAGT
TCCAACGTGG TGCCGCTGGA CGTCGCGCTC GGGCTGGTGC TGGGCGCCAA CCTCGGCAGC
GGCCTGCTGG CGGTGCTGAC CACGGCCAAG TCCGCGGTGC CGGTGCGGCA GGTCACGGTG
GGCAACCTGC TGTTCAAGGG GCTGGGCGTG GCCATCGTCG CGCCTTTCGT CGGGCTCTGG
CTGCGCTACG TGCAGCCGCA CGTGCCGAAC GCGACGCACG GCGTGGTGCT GTTCCACCTG
GCGTTCAACG TGCTCATCAG CCTGGGCTTC ATCGGGCTCA CGCAGTGGGT TGCCGCGCTG
GTCACGAAGA TGCTGCCGGT GCCGCCGCTG CCGGCCACTT CCACGCGGCC GCATCACCTC
GACCCGTCGG CGCTGTCGAC GCCCTCGCTC GCCATTTCCA ACGCGGCGCG CGAGGCGCTG
CACCAGGCCG ACGTGGTGGA GACCATGCTC ATCGGTACGC TCGACGTGAT CCGCCACAAC
GACCTGCGCC TGGCGCAGGA GCTGCGGCAG CTCGACGACA CGGTGGACGA GCTCTACTCG
GCCATCAAGT ACTACATGAC GCGCATCTCG CGCGAGGCGC TGGGCGAGGA AGAAAGCCGG
CGCTGGACCG ACATCATCAG CTTCACCATC AACATGGAGC AGATCGGCGA CATCATCGAG
CGCGTGATCA TCGACATCGA GGACAAGAAG ATCAAGCCGC AGCGCAATTT CTCCGAGGCG
GGCATGGCGG AAATCGTCGA GCTGCACGGG CGGCTGGTCG CCAACCTGCG GCTGAGCATG
AGCGTCTTCC TGAACGGCAA CGTGCGCGAC GCGCAGCGGC TGCTCGAGGA GAAGGCGCGC
TTCCGCGACC TCGAGCGGGC CTATGCCACC ACCCACCTCG ACCGCCTCTC CGACCGCACC
ACGCTGAGCA TGGAGACCAG CTCGCTGCAC ATCGACCTGA TCAGCGACCT GAAGCGGATC
AACTCGCACA TCTGCTCCAT TGCCTATCCG ATCCTCGAAT CGGCGGGCGC GCTGGCACCA
AGCCGGCTGC GCGAATCGCG GCTCGGGAAG ATCGAGGGCT GA
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| Protein sequence | MKHLLNLLAA VALLVWGTHL VRTGVLRVFG ANLRKILVQS MRNRFTAALS GIGVTALVQS
STATSLMTSS FVGQGLVTLP AALAVMRGAD VGTALISVLF SADLSWLSPM FIFVGVVLFI
TRSASVAGRV GRVLIGLGLM LLALQLVVEA TEPLFSAPAV RVLLASLNSD VLLEITIGAA
LAIVAYSSLA VVLLVAAMAS SNVVPLDVAL GLVLGANLGS GLLAVLTTAK SAVPVRQVTV
GNLLFKGLGV AIVAPFVGLW LRYVQPHVPN ATHGVVLFHL AFNVLISLGF IGLTQWVAAL
VTKMLPVPPL PATSTRPHHL DPSALSTPSL AISNAAREAL HQADVVETML IGTLDVIRHN
DLRLAQELRQ LDDTVDELYS AIKYYMTRIS REALGEEESR RWTDIISFTI NMEQIGDIIE
RVIIDIEDKK IKPQRNFSEA GMAEIVELHG RLVANLRLSM SVFLNGNVRD AQRLLEEKAR
FRDLERAYAT THLDRLSDRT TLSMETSSLH IDLISDLKRI NSHICSIAYP ILESAGALAP
SRLRESRLGK IEG
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