| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1258 |
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| Symbol | |
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| ID | 7973182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1371778 |
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| End bp | 1372764 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791855 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002943175 |
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| Protein GI | 239814265 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.292182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCA AAGCCGTCCG TATCGACCGC CATGGCGGCC CCGAGGAACT GAAGATCGTC
GACGTCGAGG TGGGCGAGCC CGGCCCCGGC GAGATCCGCA TCCGCCACAA GGCCGTGGGC
CTGAACTTCA TCGACACTTA CCAGCGCAGC GGGCTCTATC CGTTCCAGAT GCCGCTGCAG
CTGGGCATGG AAGCCTCGGG CGTGGTCGAG GCGGTGGGCG AAGGCGTGGC GCACCTGAAG
GCCGGCGACC GCGCCGCCTA TGCGAGCCAG CCGCCCGGCG CCTACTGCGA GCTGCGCGTG
ATGCCGGCCA GGAACGTCTG CAAGCTGCCC GATGCGATCT CCTTCGAGAC CGGCGCGGCC
ATGATGCTCA AGGGCCTCAC GACGCAATAC CTGCTGAAGA AGACGCTGCC GGCCGAAGGC
CTGCAGCCCG GCGACTTCAT CCTGTTCCAC GCAGCGGCCG GCGGCGTCGG CCTGATCGCC
TGCCAGTGGG CCAAGGCGCT CGGCCTGCAG CTGATCGGCA CGGCCGGCAG CGACGCCAAG
TGCAAGCTCG CGCTCGAACA CGGCGCGGCG CATGCCATCA ACTACAGCAC CGAGAACTTC
GCGGCCCGCG TCAAGGAGAT CACCGGCGGC AAGGGCGTGA AGGTGGTGTA CGACTCGGTC
GGCAAGGACA CCTGGGAAGG CTCCATCGAC TGCCTGCGCC CGTTCGGCCT GCTGGCGGTG
TTCGGCAACG GCTCGGGCCC GGTACCGCCG ATCAGCCTGG GCACGCTCGC GTCCAAGGGC
TCGCTCTACG TGACGCGGCC GACGCTGTTC ACGCACATTG CCACGCGCGA GAGCACGCAG
GCCATGGCCG ACGACCTGTT CGCCGTGGTG CAGAGCGGCG CGGTGAAGAT CCCGATCGAC
CAGCGCTATG CACTGGCCGA CGTGCAGCAG GCGCACCGCG ACCTGGAAGC GCGCAAGACC
ACCGGCTGCA CCATCCTCAC GCTCTGA
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| Protein sequence | MMSKAVRIDR HGGPEELKIV DVEVGEPGPG EIRIRHKAVG LNFIDTYQRS GLYPFQMPLQ
LGMEASGVVE AVGEGVAHLK AGDRAAYASQ PPGAYCELRV MPARNVCKLP DAISFETGAA
MMLKGLTTQY LLKKTLPAEG LQPGDFILFH AAAGGVGLIA CQWAKALGLQ LIGTAGSDAK
CKLALEHGAA HAINYSTENF AARVKEITGG KGVKVVYDSV GKDTWEGSID CLRPFGLLAV
FGNGSGPVPP ISLGTLASKG SLYVTRPTLF THIATRESTQ AMADDLFAVV QSGAVKIPID
QRYALADVQQ AHRDLEARKT TGCTILTL
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