| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1247 |
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| Symbol | |
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| ID | 7973171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1359949 |
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| End bp | 1360476 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791844 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943164 |
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| Protein GI | 239814254 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.883347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAC CCAACGCATC CGACACCGGC AGCCCCGTGC TCACGGGCCT GGCCCCCATC
GTCTCGCCCG CCACCGTCGT ACTGATCCTG GGCAGCTTCC CGGGCGTGCG CTCGCTCGAA
CTGCAGCAGT ACTATGCGCA TCCGCAAAAT CAGTTCTGGA AAATCTTGCA AGCCGTTTGG
CCCCACCATC CGCTCCCCAT GGGCGCAGAC AGCTATCCCG AGAAGAAAAA GTGGCTGCTC
GAGCGCGGCC TGGGCGTGTG GGACGTGTAC GCGGCCTGCG AGCGCGAGGG CAGCCTCGAC
TCCGCCATCC GCGCGCCCGT GGCCAACGAT ATCGCGGGCC TGCACCTGCC CCGGCTCGCG
GCCATTGCGC ACAACGGCGG CGAGAGCTTC AAGCATGCGC GCCATACGCG CACCCTCGGG
GTGCCGGTCT ACCAGCTGCC TTCCACCAGC CCCGCCAACG CGTCGTGGAG CTTCGAGCGC
AAGCTCGAAG CCTGGCGCAA GGTCTTCGAC GCCCACCACC TTCTTTGA
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| Protein sequence | MNPPNASDTG SPVLTGLAPI VSPATVVLIL GSFPGVRSLE LQQYYAHPQN QFWKILQAVW
PHHPLPMGAD SYPEKKKWLL ERGLGVWDVY AACEREGSLD SAIRAPVAND IAGLHLPRLA
AIAHNGGESF KHARHTRTLG VPVYQLPSTS PANASWSFER KLEAWRKVFD AHHLL
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