| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1243 |
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| Symbol | |
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| ID | 7973167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1356316 |
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| End bp | 1357329 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791840 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_002943160 |
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| Protein GI | 239814250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0714] MoxR-like ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG AGAACCCCTT TTCCACCTCT CCCGCCACGG CCGAGCTGAT GGAGCAGATC
CTCTACGAGG TCAAGCGCGT GGTGGTGGGC CAGGACCGCT TCCTGGAGCG CGTGATGGTG
GCCATGCTCG CGGGCGGGCA CCTGCTGGTC GAGGGCGTGC CGGGCCTTGC CAAGACACTC
ACCATCAAGA CGCTGGCCGA CACCGTGCGC GGACAGTTCA AGCGCATCCA GTTCACGCCC
GACCTGGTGC CGGCCGACCT GGTGGGCACG CGCATCTACA ACCAGAAGAC CGGCGAGTTC
AGCACCTCGC TCGGCCCGGT GTTCGCCAAC CTGCTTCTGG CCGACGAAAT CAACCGCGCG
CCGGCCAAGG TGCAGAGCGC GCTGCTCGAA GTGATGCAGG AGCGCCAGGT CACCATTGCC
GGCGAGACGC ACAAGGTGCC GCGCCCCTTC CTGGTGATGG CCACGCAGAA CCCCATCGAA
ACCGAGGGTA CCTATCCGCT GCCCGAGGCG CAGGTCGACC GCTTCATGAT GAAGGTGCTG
GTCGACTACC CGAGCGACGA GGAAGAGTTC GTCATCGTCC AGCGCGTGAT CGGCTCGCTG
GTCGAGGTCA ATCCGGTGGC GACCACCGAG CAGCTCGCCA CCCTGCAGGC CGAGGCGCGG
CGCGTGTACG TCGATCCCTC GCTCATCCAG TACGCGGTCA AGCTGGTGTC GGCCACGCGC
ACGCCCGACA AGCACGGCCT GAAGGACATG CGCCGCTTCA TCACCTTCGG CGCGAGCCCG
CGCGCGAGCA TCAGCCTGAC CGAAGGCGCA CGCGCACTCG CGCTGCTGCG CGGCCGCAGC
TATGCCCTGC CCGAGGACAT GACCGCGCTG GTGCCCGACG TGCTGCGCCA CCGCGTGACG
CTTTCCTACG AAGGCTTGTC CGAAGGCCTC ACACCCGACG GCCTGGTCGA GAAGATCATG
AAGGCCGTTC CCGCTCCTCC CAAACCGCTC GAACATGAAA AGCTGGTGGC CTGA
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| Protein sequence | MSTENPFSTS PATAELMEQI LYEVKRVVVG QDRFLERVMV AMLAGGHLLV EGVPGLAKTL
TIKTLADTVR GQFKRIQFTP DLVPADLVGT RIYNQKTGEF STSLGPVFAN LLLADEINRA
PAKVQSALLE VMQERQVTIA GETHKVPRPF LVMATQNPIE TEGTYPLPEA QVDRFMMKVL
VDYPSDEEEF VIVQRVIGSL VEVNPVATTE QLATLQAEAR RVYVDPSLIQ YAVKLVSATR
TPDKHGLKDM RRFITFGASP RASISLTEGA RALALLRGRS YALPEDMTAL VPDVLRHRVT
LSYEGLSEGL TPDGLVEKIM KAVPAPPKPL EHEKLVA
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