| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1231 |
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| Symbol | |
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| ID | 7973155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1346074 |
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| End bp | 1347168 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791828 |
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| Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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| Protein accession | YP_002943148 |
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| Protein GI | 239814238 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC TCTTCCACCC CCTGCGCGTG AAGGCCGTCG AACCCGACAC CTCGGAGGCC
GTCATCGTCT CCTTCGAAGT GCCGCCCGAG CTGCAGCAAG TCTTCGGCTT CACGCAGGGC
CAGTACCTCA CGCTGCGGCG CGACATCGAC GGGCAGGACC TTCGCCGCTC GTATTCGATC
TGCGCCGGCC TGGACGACGG CGAGCTGCGC GTGGGCGTGC GCAAGGTGCA AGGCGGCGTG
TTCTCCAACT GGATCAACGC GCACCTGCAG CCCGGCGACA CGGTGCAGGT GATGGCGCCG
CAGGGCCGCT TCTTCGTGCC GATCGAGCCG GGCTCCGCAC GGCACCACGT CGGCATTGCG
GGCGGCAGCG GCATCACGCC CATTCTCTCG ATCATGAAGA CCGTGCTGGC GCGCGAGCCG
CTGAGCCGCT TCACGCTGAT CTACGGCAAC CGGCAGCTGC AGTCCACGAT GTTCAAGGAA
GAGATCGAGG ACCTGAAGAA CCGCTACATG ACGCGGCTCG CGCTGCAGCT GGTGTTCTCC
GACGAGCAGA CCGATTCGCC GCTCGGCCGC GGCGTGATGA ACCGCGAGAA GATCGGCGAA
TTCCTGAACA CGCTGGTGCC GGCGGCCGGC ATCGACCACG CCTACATCTG CGGCCCGTTC
CAGATGAACG ACGAGGCCGA GGCCGCGCTG CTGGCCGCGG GCGTGCCCGA GGAGCGCATC
CACATCGAGC GCTTCGGCGT CGCGCTGCCT TCGGCCGCGT CAGCGGGCCA GGTGGGTGCG
GTGGTGCACG AAGCGCTGCC CGGCGATGCC AAGCAGGCGC GCATCACCAT CGTGCGCGAC
GGGCTGCAGC GCGAGATCAC TTTCACCGAA GGGCAGCCGA GCATCCTCGA TGCGGCGTCG
GCCGCCGGGC TCGAAGTGCC GTTCTCCTGC ACCTCCGGCG TGTGCGGCAC CTGCCGCGCG
AAGCTGGTGG AGGGGGAAGT CCGCATGGAA AGAAACTTTG CGCTCGACAA GAATGAAGTA
GCCGCGGGAT TCGTGCTGAC CTGCCAGGCC CACCCTCTCA CAGAACGCGT CACCTTGTCC
TTCGACGAGC GTTGA
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| Protein sequence | MSTLFHPLRV KAVEPDTSEA VIVSFEVPPE LQQVFGFTQG QYLTLRRDID GQDLRRSYSI
CAGLDDGELR VGVRKVQGGV FSNWINAHLQ PGDTVQVMAP QGRFFVPIEP GSARHHVGIA
GGSGITPILS IMKTVLAREP LSRFTLIYGN RQLQSTMFKE EIEDLKNRYM TRLALQLVFS
DEQTDSPLGR GVMNREKIGE FLNTLVPAAG IDHAYICGPF QMNDEAEAAL LAAGVPEERI
HIERFGVALP SAASAGQVGA VVHEALPGDA KQARITIVRD GLQREITFTE GQPSILDAAS
AAGLEVPFSC TSGVCGTCRA KLVEGEVRME RNFALDKNEV AAGFVLTCQA HPLTERVTLS
FDER
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