Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1223 |
Symbol | |
ID | 7973147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1336771 |
End bp | 1337574 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791820 |
Product | Abortive infection protein |
Protein accession | YP_002943140 |
Protein GI | 239814230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCTC CTAAAAGCAC GGCCTTTCCC TCTGCCACGC AGGCCGCGCT GCTGTTCCTT GCGGTGTTTC TCTGCGAATT CGCGATCGGC GCTGCGCTGC GCGATGCCAA TCGCTGGCTC GGCCTGAACG GCATGCAGCT CGGCGTGCTG TCGGCGGTGC TGGGCAACGG CTGCGTGTTC GCCGTGGTGA TGCACCAGCA GAAGCTCAGC TACCGCGAAC TCTTCCACCA GTCGCCGGCT TCCGCCCGCG CCACCCTGAT GCTGGTCGTG CCGCCCGTGC TGCTGCTCGT GCCGGGGCTG ATGGTGGTGA TGGCCGCCGT GCTCAACCTG CTGATTCTCA TCGCGCCGCT TTCCGCCTGG GAGGAGTCGA TGTTCAGCCG CATGGCCGAC GGCAGCGTCG CGGCCACGCT GGCCGTGTGC CTGATGGCGC CGCTGCTCGA GGAAATGCTG TTCCGCGGCA TCGTGCTGCG CGGGTTCTTG CTGCGCTATT CGCGCTGGCA GGCCATCGTG GGCTCGGCGC TGCTCTTTGG CGCCGCGCAC CTGAACATCT ACCAGTTCGT CGTGGGCCTG GTGATGGGCA CCGTGCTCGG ATGGCTCTAT GAGCGCAGCC GCTCGCTCAT CCCGTGCATC GCGCTGCACG CGGCCTACAA CAGCGGCACC ATCTTCATCG GCGACTGGCC GGATGGCAGC TCGACGGCGG ACACGGCGTG GGCCTTGCTG CTCGTCTTTA TCGCGGGCCT GTGCGGCGTG CTCGCATTGC GCCGCATGCT GGTGGTGCCG GTCGCGCGCA ACCCCGTTCC CTGA
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Protein sequence | MPSPKSTAFP SATQAALLFL AVFLCEFAIG AALRDANRWL GLNGMQLGVL SAVLGNGCVF AVVMHQQKLS YRELFHQSPA SARATLMLVV PPVLLLVPGL MVVMAAVLNL LILIAPLSAW EESMFSRMAD GSVAATLAVC LMAPLLEEML FRGIVLRGFL LRYSRWQAIV GSALLFGAAH LNIYQFVVGL VMGTVLGWLY ERSRSLIPCI ALHAAYNSGT IFIGDWPDGS STADTAWALL LVFIAGLCGV LALRRMLVVP VARNPVP
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