| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1201 |
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| Symbol | |
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| ID | 7973370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1314215 |
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| End bp | 1315651 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644791797 |
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| Product | Cytochrome b/b6 domain protein |
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| Protein accession | YP_002943118 |
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| Protein GI | 239814208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.690827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT TCCACGAAAT TTCCCCCAAC GCGCCCGCCG GCGAGAAGCT GCTCAACTGG
GTCGACAACC GCTTCCCGCT GAGCAAGCTC TGGAACGACC AGTGGGGCAA GTACTACGCG
CCGAAGAACT TCAACTTCTG GTACATCTTC GGCTCGCTCG CGATGCTGGT CCTCGTGATC
CAGATCGTGA CCGGCATCTT CCTCGTGATG CACTACAAGC CCGACGCGAA CCAGGCGTTC
GCATCGGTCG AGTACATCAT GCGCGACGTG CCCTGGGGCT GGCTCATCCG CTACATCCAC
TCGACGGGCG CCTCGGCGTT CTTCATCGTG GTGTACCTGC ACATGTTCCG CGGCCTCATG
TACGGCAGCT ACCGCAAGCC GCGCGAGCTG ATCTGGGTCT TCGGCTGCGC GATCTTCCTG
TGCCTGATGG CCGAGGCCTT CATGGGCTAC CTGCTGCCAT GGGGCCAGAT GAGCTACTGG
GGCGCCCAGG TGATCGTGAA CCTGTTCGCG GCCATCCCGT TCATCGGCCC TGACCTCGCG
CTGCTGATCC GCGGCGACTA CGTGGTGAGC GACGCCACGC TGAACCGCTT CTTCAGCTTC
CACGTGATCG CCGTGCCGCT GGTGCTGCTC GGCCTGGTGG TGGCCCACCT GATCGCGCTG
CACGAAGTGG GCTCCAACAA CCCCGACGGC ATCGAGATCA AGGCCAAGCG CGGCCCCGAC
GGCCATCCGC TGGACGGCAT TCCGTCGCAT CCGTACTACA CGGTGCACGA CATCTTCGGC
GTGGTGGTGT TCCTCACGAT CTTCTCGGCC GTGATCTTCT TCGCGCCGGA AGCGGGCGGG
TACTTCCTCG AGTACAACAA CTTCATTCCG GCCGATTCGC TCAAGACGCC GAACCACATT
GCGCCGGTCT GGTACTTCAC GCCGTTCTAT TCGATGCTGC GTGCAACCAC CGACGACATG
GTCAACGTGT TCGCGCTGAT CATCGCCGCG GCCGCCGTCC TGAACTTCAT CAAGGGCAAG
TCGAGCATGG CCCTGAAGAT CGCGCTGGTC GTCGTGGCGG CCGTGGTCAT CTTCCTGCTC
AAGGCCTTCG ACGCCAAGTT CTGGGGCGTG CTCGTGATGG GCGGCTCGGT CATCATCCTG
TTCTTCCTGC CATGGCTCGA CAAGAGCGAA GTCAAGTCGA TCCGCTACCG TCCGGGCTGG
CACAAGTATG TCTACGGCGT CTTCGTGTTC TTCTTCCTGA TCCTGGGCTA CCTGGGCATC
CAGGCGCCCG GCGTCTGGGG CAGCCTGGTC ATCGGTTCGT TCGCGCTGGA CATCGCGCAG
ACCATTTCCC AGATCGGCAC GCTTTTCTAC TTCGGTTTCT TCCTGCTCAT GCCCTGGTGG
AGCAGCAAGG GCGAGTTCAA GCCCGTGCCT GAGCGCGTGA CCTTCGCCGC CCATTGA
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| Protein sequence | MAEFHEISPN APAGEKLLNW VDNRFPLSKL WNDQWGKYYA PKNFNFWYIF GSLAMLVLVI
QIVTGIFLVM HYKPDANQAF ASVEYIMRDV PWGWLIRYIH STGASAFFIV VYLHMFRGLM
YGSYRKPREL IWVFGCAIFL CLMAEAFMGY LLPWGQMSYW GAQVIVNLFA AIPFIGPDLA
LLIRGDYVVS DATLNRFFSF HVIAVPLVLL GLVVAHLIAL HEVGSNNPDG IEIKAKRGPD
GHPLDGIPSH PYYTVHDIFG VVVFLTIFSA VIFFAPEAGG YFLEYNNFIP ADSLKTPNHI
APVWYFTPFY SMLRATTDDM VNVFALIIAA AAVLNFIKGK SSMALKIALV VVAAVVIFLL
KAFDAKFWGV LVMGGSVIIL FFLPWLDKSE VKSIRYRPGW HKYVYGVFVF FFLILGYLGI
QAPGVWGSLV IGSFALDIAQ TISQIGTLFY FGFFLLMPWW SSKGEFKPVP ERVTFAAH
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