| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1175 |
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| Symbol | |
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| ID | 7973344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1289051 |
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| End bp | 1289830 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791771 |
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| Product | imidazoleglycerol phosphate synthase, cyclase subunit |
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| Protein accession | YP_002943092 |
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| Protein GI | 239814182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCAA AACGCATCAT TCCCTGTCTC GACGTCACCG GCGGCCGCGT GGTCAAGGGC
GTCAATTTTC TCGAGCTGCG CGACGCCGGC GATCCGGTCG AGATTGCGGC GCGCTACAAC
GCGCAGGGGG CCGACGAGCT CACTTTCCTG GACATCACGG CCACCAGCGA CGGGCGCGAC
CTGATCCTGC CGATCATCGA GGCGGTGGCC TCGCAGGTCT TCATTCCATT GACCGTGGGC
GGCGGCGTGC GCACCGTGGC CGACGTGCGC CGGCTGCTCA ATGCGGGCGC CGACAAGACC
AGCTTCAATT CGGCGGCCAT TGCCGATCCG CAGGTGATCA ACGACGCCTC GCAGAAGTAC
GGTTCGCAAT GCATCGTCGT GGCCATCGAC GCCAAGCGCC GCAGCCCCGA AGAAGCCGCC
ACGCGCGGCG CGGGCTGGGA CGTGTACAGC CATGGCGGCC GCAAGAACAC CGGCCTGGAC
GCCGTCGAAT GGGCAACCGA GATGGTGCGC CGCGGCGCCG GCGAGATCCT GCTCACGAGC
ATGGACCGGG ACGGCACCAA GAGCGGCTTC GACCTTGCGC TCACCCGTGC GGTCAGCGAC
GCCGTCAACG TGCCGGTCAT TGCCTCGGGC GGCGTGGGCA GCCTCGACGA CCTGGCCGAC
GGCATCCAGA CCGGCGGCGC CGACGCGGTG CTGGCCGCCA GCATCTTCCA CTACGGCGAG
CACACGGTCG GCGAGGCGAA AGCCCGCATG GCCGCGCGGG GCATTCCGGT CCGGACCTGA
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| Protein sequence | MLAKRIIPCL DVTGGRVVKG VNFLELRDAG DPVEIAARYN AQGADELTFL DITATSDGRD
LILPIIEAVA SQVFIPLTVG GGVRTVADVR RLLNAGADKT SFNSAAIADP QVINDASQKY
GSQCIVVAID AKRRSPEEAA TRGAGWDVYS HGGRKNTGLD AVEWATEMVR RGAGEILLTS
MDRDGTKSGF DLALTRAVSD AVNVPVIASG GVGSLDDLAD GIQTGGADAV LAASIFHYGE
HTVGEAKARM AARGIPVRT
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