| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1154 |
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| Symbol | |
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| ID | 7973323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1271414 |
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| End bp | 1272274 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791750 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943071 |
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| Protein GI | 239814161 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGA AGGTGCCCGG CTTTTTTATT GAGATGGAAT CAGCCGCACC CCTGCCACAC
CCCTTTGTAG AGTTCCGCGA CGTTGCGTTC GGCTATGGTG CGCGCGCGAT CCTCGGCGGT
GTGTCGTTTG CCGTGCCGCG CGGCAAGGTG ACGGCGCTGA TGGGCGCCTC GGGCGGCGGC
AAGACCACCG TGCTGCGGCT CATCGGCGGC CAGCAGCGGG CGCAGCGCGG CGAGGTGCTT
TTCGACGGCC AGGACGTCGG CAAGCTCGAT GCCGCCGGGC TGTACAAGGC GCGGCGCCGC
ATGGGCATGC TGTTCCAGTT CGGTGCGCTG TTCACCGACA TGAGCGTGTT CGACAACGTC
GCGTTTCCGC TGCGCGAGCA CACGCAGCTC TCGGAAGCGC TGGTGCGCGA CATCGTGCTC
ATGAAGCTCG ACGCGGTCGG CCTGCGCGGT GCGCGCGACC TGATGCCCAG CGAAGTGTCC
GGCGGCATGG CGCGGCGCGT GGCTCTTGCG CGCGCCATTG CGCTCGACCC CGACCTCGTG
ATGTACGACG AACCCTTTGC CGGCCTCGAC CCGATTTCCC TCGGCACGGC CGCGCGGCTG
ATCCGCCAGC TCAACGACAC GCTGGGGCTG ACCAGCATCG TCGTGTCGCA TGACCTCGAG
GAAACCTTCC GCATTGCCGA CCACGTGATC ATCCTGGCCA ACGGCGGCAT CGCCGCGCAA
GGCACGCCTG AAGAAGTGCG GGGGAGCGCC GATCCCCTGG TGCACCAGTT CGTCAATGCA
CTGCCCGACG GGCCGGTGCA TTTTCACTAC CCCGTGGCCG GCATCGAGGA AGATTTCGGC
AATGAGGGGG GACGGGCATG A
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| Protein sequence | MPEKVPGFFI EMESAAPLPH PFVEFRDVAF GYGARAILGG VSFAVPRGKV TALMGASGGG
KTTVLRLIGG QQRAQRGEVL FDGQDVGKLD AAGLYKARRR MGMLFQFGAL FTDMSVFDNV
AFPLREHTQL SEALVRDIVL MKLDAVGLRG ARDLMPSEVS GGMARRVALA RAIALDPDLV
MYDEPFAGLD PISLGTAARL IRQLNDTLGL TSIVVSHDLE ETFRIADHVI ILANGGIAAQ
GTPEEVRGSA DPLVHQFVNA LPDGPVHFHY PVAGIEEDFG NEGGRA
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