| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1150 |
|---|
| Symbol | |
|---|
| ID | 7973319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 1263140 |
|---|
| End bp | 1264024 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644791746 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002943067 |
|---|
| Protein GI | 239814157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CGGCAGCAAC CAAGGCCGTG AAGACGGCCA AGACCGCCAA GGCCGAAGCC
GAGCTGGCGG AGGTCCTGCG GCCGGGCCAG TCGATCGAGC TTCTGAAGGA GCTGCACATC
CTCACGCGCG AAGGCCGGCT CAACCAGGAT TCGCGGCGCA AACTCAAGCA GGTCTACCAC
CTGTTCCAGT TCATCGAGCA GCTGCTGCGC GAACTGCCGG GCGGCGGCGC GGAAGCCACG
CTGGCCGACC ATGGCGCGGG CAAGTCGTAC CTGGGCTTCA TCATCTACGA CCTGTTCTTC
CGCTCGCGCG AAGGCGGCCA TGTCTACGGC ATCGAGACGC GCAGCGAGCT GGTCGAAAGA
TCGCGCGCAT TGGCGCGCCA GCTCGGCTTC GACCGCATGT CCTTCCTGAA CCTCACCGTG
GCCGAGTCGG CCCAGGCGAG CGAACTGCCC GAGCGCATCG ACGTGGTCAC CGCGCTGCAC
GCCTGCGACA CCGCCACCGA CGACGCGATC GCCTTCGGGC TCGCAAAGAA GGCGCGCTGC
ATGGTGCTGG TGCCCTGCTG CCAGGCCGAG GTGGCGGCCT GCCTGCGCGA AACCAAGGCG
CTGGCCTTGT CGCGCACGCC ATTGGCCGAG CTCTGGCGCC ATCCGCTGCA CACCCGCGAA
ATCGGCAGCC AGCTCACCAA CGTGCTGCGC TGCCTGTACC TCGAGGCCAA TGGCTACAGC
GTCACGGTCA CCGAACTGGT GGGCTGGGAG CACAGCATGA AGAACGAGCT GATCCTGGCG
CGCCACACCG GCCAGCGCAA GGCCGGTGCG GCGGCGCGGC TCGGCGAGCT GCTGTCGCAG
TTCGGGCTCG ACACGCTGGG CGAGACGCGG TTTCGCCTGC CCTGA
|
|---|
| Protein sequence | MSAPAATKAV KTAKTAKAEA ELAEVLRPGQ SIELLKELHI LTREGRLNQD SRRKLKQVYH
LFQFIEQLLR ELPGGGAEAT LADHGAGKSY LGFIIYDLFF RSREGGHVYG IETRSELVER
SRALARQLGF DRMSFLNLTV AESAQASELP ERIDVVTALH ACDTATDDAI AFGLAKKARC
MVLVPCCQAE VAACLRETKA LALSRTPLAE LWRHPLHTRE IGSQLTNVLR CLYLEANGYS
VTVTELVGWE HSMKNELILA RHTGQRKAGA AARLGELLSQ FGLDTLGETR FRLP
|
|---|
| |