Gene Vapar_1135 details

Gene Information

• Locus tag: Vapar_1135
• ID: 7969657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1248046
• End bp: 1248714
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644791731
• Product: Ferric reductase domain protein protein transmembrane component domain protein
• Protein accession: YP_002943052
• Protein GI: 239814142
• COG category: [S] Function unknown
• COG ID: [COG2717] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.648504
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGC TGCTCATGCA TCCGGCGGCC AAGCCGGTCA TCTTCCTGCT GTGCCTGCTG 
CCGTTCGCGC GGCTGGCCTA TGGCGCATTC ACCGACGGGC TGGGCGCGAA TCCGGCCGAG 
TTCCTGATCC GCGCCACCGG CGACTGGACC CTGCGCTTCA TCTGCATCGT GCTGGCGGTG 
ACGCCGCTGC GCGTGATGGC CAAGGCCAAT GCGCTGGCGC GCTTTCGCCG CATGCTGGGG 
CTGTTCGCGT ATTTCTATGT GGTGCTGCAC CTGCTGTGCT ACAGCTGGTT CGACATGGGC 
TTCGAGTGGG CCGACATCGC CAAGGACATT GCCAAGCGGC CGTTCATCCT GGTGGGTTTC 
TCGGCCTTCG TGCTGCTGAC GCCGCTGGCG GCCACCTCGT TCAACCGCGC CATCAAGGCC 
ATGGGCGCCA GGCGCTGGCA GATGCTGCAC AAGCTGGTCT ACCTGATCGC CGGCCTGAGC 
CTGCTGCACT TCTTCTGGAT GCGTGCGGGC AAGAACAACT TTGCCGAAGT GTTCGTCTAT 
GCCGCGATCA TCGCGGTGCT GCTCGGATGG CGCGTGTGGA ACTACGCGAG CAAGCGCAGG 
CCGAAGCCGT CGGCCGGCGT GCGTGGCGGC AGCGGCAGCG AGAAGGCACT GCGCAGCAGC 
ACCGGCTGA 

 

Protein sequence

MNKLLMHPAA KPVIFLLCLL PFARLAYGAF TDGLGANPAE FLIRATGDWT LRFICIVLAV 
TPLRVMAKAN ALARFRRMLG LFAYFYVVLH LLCYSWFDMG FEWADIAKDI AKRPFILVGF 
SAFVLLTPLA ATSFNRAIKA MGARRWQMLH KLVYLIAGLS LLHFFWMRAG KNNFAEVFVY 
AAIIAVLLGW RVWNYASKRR PKPSAGVRGG SGSEKALRSS TG