Gene Vapar_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1062 
Symbol 
ID7969584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1164894 
End bp1166000 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID644791658 
Productacyltransferase 3 
Protein accessionYP_002942979 
Protein GI239814069 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.253972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAC AAGGGTCGAT CCACGGCCTC GGCGACTACC TGGAGACCCG CAATTTCGCA 
GCGCTCGATG GGCTGCGGGC GGTGGCCGTC TTTCTTGTCT TCGGGTTCCA CTTCGGCGGT
CCGCGCTGGG ACAAGTTCTC GGGCTGGCTC GGCGTGCATG CCTTCTTCGT GCTCTCCGGC
TTCCTGATCA CCACGCTGCT GCTGCGCGAG CGCGATGCCG CCGGCACGGT GTCGCTCAAG
GCCTTCTACA TCCGGCGCGC GGCCCGGATC CTGCCGCTCT ATTTTCTGGT CTACCTGCTG
GTGCTCGCGC TGAGCTATGT CACCGAGGGC GCGGCCTGGG AGCAGATGAA GGCGGCCACG
CCCTACTACC TCACGCTGCT GAACGAGTTT GCCGGCTTCG CGCCGCTGCA GATGACCTGG
ACGCTGGGCG TCGAGTGGAA GTACTACCTG GTGTGGCCGG CGCTGTTCAC GCTGTTCGGT
TCCACCGCCG CCTCGCGCTT CGGGACCGCC GCATGCAGCC TCGCGCTGCT GGTGGCCGTC
TGGATGACCG GTGCCCACCC GGCCGGATTC TCGCCCTGGC ACTACCTTGG CATGCTGGTG
GGCTCGATGG TGGCGATCGC GATGCACACG CGCCGGACCT TCGCATGGAT GCGCGGCCTC
ATGACGCAGA CGGCCGCCAT CGCGATCGCG GTCGCCCTGT TCCTGGTGCA CCGCAAGTCG
CTCACGATCA GCGCCCGCTT CGGCGAGCCG CAGCTGATTG CCGTGTACGT GGTGCTGGTG
GGCCTGTGGC TGCCTTCGCT GGCTGCGGCG GACAGCTGGC TGCGCAGGCT TCTTTCGTCG
CGCTTCATGC TGTTCGTGGG GCGCCGCTCG TACGCGATGT ACCTGGTGCA GTACCTCGCG
GCGCAGGCCG TGATCGGCAT CTCGCCCACC ACGGTGGCGG GGGCGACGCT GCTGTTCGCG
TCCTTCGGCG TGGCACTGCT TGTCTCCGAC TTTCTCTACC GCCGGTTCGA GAAGCCGATC
ACCGACTGGG GCCACCGGCA GGCCCGGGCG GCCACCCAGC CGGCCTCCGC CTTGCCGGCC
GCATCGGGCG GCGCCGCGTC GGCCTGA
 
Protein sequence
MREQGSIHGL GDYLETRNFA ALDGLRAVAV FLVFGFHFGG PRWDKFSGWL GVHAFFVLSG 
FLITTLLLRE RDAAGTVSLK AFYIRRAARI LPLYFLVYLL VLALSYVTEG AAWEQMKAAT
PYYLTLLNEF AGFAPLQMTW TLGVEWKYYL VWPALFTLFG STAASRFGTA ACSLALLVAV
WMTGAHPAGF SPWHYLGMLV GSMVAIAMHT RRTFAWMRGL MTQTAAIAIA VALFLVHRKS
LTISARFGEP QLIAVYVVLV GLWLPSLAAA DSWLRRLLSS RFMLFVGRRS YAMYLVQYLA
AQAVIGISPT TVAGATLLFA SFGVALLVSD FLYRRFEKPI TDWGHRQARA ATQPASALPA
ASGGAASA