| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0988 |
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| Symbol | |
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| ID | 7971959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1086790 |
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| End bp | 1088049 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791584 |
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| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
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| Protein accession | YP_002942905 |
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| Protein GI | 239813995 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT ATCTCGTCGG CGGCGCGCTG CGCGACCGGC TGCTGGGGCG GCCGGTGTCG
GACCACGACT GGCTGGTGGT GGGCGCCACG CCCGAGGAAA TGGCGGCGCG CGGCTACCTG
CCCGTGGGGC GCGACTTTCC GGTGTTCCTG CATCCGCAGA CCCGCGAGGA ATACGCGCTG
GCCCGCACCG AGCGCAAGAG CGCGCCCGGC TACCGCGGCT TCACCGTGCA CGCCTCGCCC
GACGTCACGC TCGAGCAGGA CCTCGCGCGG CGCGACCTCA CGGTCAACGC GATCGCGCTG
CCTGCCGAAT TCGTGGGCAC CGACGGCCGC TTCGAGCCCG ACGCCGGCAA GCTCGCCGAC
CCCTTCCATG GCCGGCGCGA CCTCGAGCAC AAGCTGCTGC GGCACGTCAC GGACGCCTTT
CGCGAAGACC CGGTGCGCAT CCTGCGGGTG GCGCGCTTCG CAGCGCGCTT CGACGATTTC
TCGGTGGCGC CCGAGACCAT GGCGCTGATG CGCGAGATGG TCCAAGCCGG CGAAGCCGAT
GCGCTGGTGC CCGAGCGCGT CTGGCAGGAG CTCTCGCGCG GGCTGATGGA AACCCGCCCG
TCGCGCATGT TCGAGGTGCT GCGTGCCTGC GGCGCGCTGG CGGTGCTGCT GCCGGAGGTC
GACCGGCTCT GGGGCGTGCC GCAGCCCGAG GCCCACCACC CCGAAGTCGA CTGCGGCGTG
CACCTGATGA TGGTCATCGA CACCAGCGCG AAGCTGCAGG CCTCGCTGCC GGTGCGCTTC
GCCTGCCTGA TGCATGACCT CGGCAAGGGC ACGACCGAGC CTGGGCTGCT GCCGCGCCAC
ATCGGCCACG AGAAGCGCAG CGCCGAACTG CTGCACGCGG TGTGCGACCG CTGGCGCGTG
CCGGTCGAGA TCCGCGAGCT CGCCGAGGTG GTGGCGCGCG AACACGGCAA CATCCATCGC
AGCGGCGAGC TCGCGGCCGC GGCGCTGGTG CGCCTGCTGG AGCGCTGCGA TGCGTTTCGC
AAGCCGGCGC GCTTTGCCGA CGTGCTGCTG GCCTGCGAAT GCGATGCGCG CGGCCGGCTC
GGCTTCGAGG ACCGGCCCTA TCCGCAGCGC GAGCGGCTGC TTGCCGTGCT CGCCACCGCC
GCGGGCGTGC CCACCGAGGC CGTGGCGCGC GCGGCGCAGC AATCCGGCGC CGCCGGGCCG
CAGATCGGCG AGGCGATCCA CCGCGCACGC GTGGAGGCGG TGGCCGCCTT GCCGGGCTGA
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| Protein sequence | MKTYLVGGAL RDRLLGRPVS DHDWLVVGAT PEEMAARGYL PVGRDFPVFL HPQTREEYAL
ARTERKSAPG YRGFTVHASP DVTLEQDLAR RDLTVNAIAL PAEFVGTDGR FEPDAGKLAD
PFHGRRDLEH KLLRHVTDAF REDPVRILRV ARFAARFDDF SVAPETMALM REMVQAGEAD
ALVPERVWQE LSRGLMETRP SRMFEVLRAC GALAVLLPEV DRLWGVPQPE AHHPEVDCGV
HLMMVIDTSA KLQASLPVRF ACLMHDLGKG TTEPGLLPRH IGHEKRSAEL LHAVCDRWRV
PVEIRELAEV VAREHGNIHR SGELAAAALV RLLERCDAFR KPARFADVLL ACECDARGRL
GFEDRPYPQR ERLLAVLATA AGVPTEAVAR AAQQSGAAGP QIGEAIHRAR VEAVAALPG
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