| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0978 |
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| Symbol | |
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| ID | 7971949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1077147 |
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| End bp | 1078010 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791574 |
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| Product | Taurine dioxygenase |
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| Protein accession | YP_002942895 |
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| Protein GI | 239813985 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.793561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC CCCAGCACTT CGAAGTGCGC CCCTTCAACG CCCCCGTCGG CGCGGAAATC
GTCGGCCTCG ACATCTCGAA GCCCATCAAC GACGAAGACT TCGCGCGCAT CCACCGCGCG
CATCTGGACC ACCACGTGCT GGTGTTCCGC AACCAGCAGA TCACTCCGGC CGAGCACATC
GAATTCAGCC GCCGCTTCGG CCCGCTCGAG ATCCATGTGC TGCACCAGTT CCATCTGAAG
AACCATCCCG AGATCCTGAT CGTCTCCAAC ATCAAGGAGA ACGGCGAGCC CATCGGCCTA
GGCGATGCGG GGGTCTATTG GCATTCGGAC ATCTCGTACA AGCCCCAGCC CAGCCTGGGC
TCGCTGCTGC ATGCGCAGGA GCTGCCGAGC GAAGGCGGCG ACACGCTCTT TGCCGACCAG
CATCTTGCGT GGGAAACGCT CTCTCCCGAG CTGCAGCAGC GCATCCTGCC GCTCAAGGCC
GAGCACAGCT ACCTTGCCAA GTACGAGGCG CTGCGCGCAA AGAACCCTTG GCGGCCCAAG
CTCTCGCAGG AGCAGATCGA CCAGGTCGCG CCCGCCGTGC AGCCGGTGGT GCGCACGCAT
CCCGAGACCG GCCGCAAGGC GCTGTTCGTC AGCGAGCATT TCACGACGCG CATCGTCGGC
CTGTCGCCGC AGGAGAGCGA CGCGCTGCTG GCCGAGCTGT TCGCGCACAG CGTGAAGCCG
CAGTTCGTGT ACCGCCACCA ATGGGCGCCG CACGACCTCG TGTTCTGGGA CAACCGCTCG
CTGATGCACC TGGCGGCCGG CACGCCGGAC CATCTGCGGC GCCGCCTCAA TCGCACCACC
ATCGTGGGCG ACACACCCTT CTGA
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| Protein sequence | MTAPQHFEVR PFNAPVGAEI VGLDISKPIN DEDFARIHRA HLDHHVLVFR NQQITPAEHI
EFSRRFGPLE IHVLHQFHLK NHPEILIVSN IKENGEPIGL GDAGVYWHSD ISYKPQPSLG
SLLHAQELPS EGGDTLFADQ HLAWETLSPE LQQRILPLKA EHSYLAKYEA LRAKNPWRPK
LSQEQIDQVA PAVQPVVRTH PETGRKALFV SEHFTTRIVG LSPQESDALL AELFAHSVKP
QFVYRHQWAP HDLVFWDNRS LMHLAAGTPD HLRRRLNRTT IVGDTPF
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