| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0977 |
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| Symbol | |
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| ID | 7971948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1076005 |
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| End bp | 1077087 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791573 |
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| Product | protein of unknown function DUF185 |
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| Protein accession | YP_002942894 |
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| Protein GI | 239813984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1565] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.247325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCG ACATCCTGAT TGCCCGTTCG GTGGAACGGG CGGGCGGATG GATCGGCTTC
GACCGTTTCA TGGCGCTGGC CCTGTATGCG CCGGGGCTGG GCTACTACGC CAACAGCTCG
GCCAAGTTCG GCCACATGCC GTCTTCGGGC AGCGACTTCG TGACGGCGCC GGAGCTCACG
CCCATGTTCG GCCAGGCGCT CGCGGCGCAG GTGGCCGAGG CGCTGGAGAA GACCGGCACC
GACACGGTCT GGGAATTCGG CGCCGGCACG GGCGCGCTCG CCGTGCAGCT GCTGCATGCG
CTCGACGAGA TCGGCCGCGG CGACGTGCGC TACCGCATCG TCGACCTGTC CGGCACCCTG
CGCGAGCGCC AGCAGCAGGC ACTCGCGCGC TACACGGACC GCGTCGAATG GCTCGGCGAA
CTGCCCGAGG CGATGCAGGG CGTGGTGGTC GGCAACGAGG TGCTCGATGC GATGCCGGTG
CAGCTCTTGG CCCGCGTGGG CGGCCAGTGG TTCGAGCGCG GCGTGGTGCG CAACGTGCGC
GCCGACGGCT GGGCCTGGGC CGACCGCGAG ACCGCGCTGC GGCCGCCGTT CGAGGTGCCC
GGCGAGCACG ACTACCTGAC CGAGATCCAT CCGCAGGCCG AGGCCTTCGT CGCGACCCTG
GCGGACCGCC TGAAGAGCGG CGCGGCCTTC TTCATCGACT ATGGTTTTCC GGAGCGCGAG
TACTACCACC CGCAGCGCCA CATGGGCACC GTGATGTGCC ACCGCGCGCA CCAGGCCGAC
GGCGATCCGC TGTCGGATGT GGGCTACAAG GACATCACGG CGCACGTCAA TTTCACCGGC
ATCGCGCTCG CGGGGCAGGA GGCCGGGCTC GAGGTGCTGG GCTACACCAG CCAGGCGAGG
TTCCTGCTGA ACTGCGGGCT GCTCGAGCGG ATGGGGCAGG GCAGCACGGC AGAAAGAGGC
ATGGCGGCTC GGCTCGTCCA TGAGCATGAG ATGGGGGAGC TGTTCAAGGT GGTGGGGTTT
GCGGTGGGGG AGGGGTGGGA GGCGATGGGG TTTGCTGAGG GGGATCGGAG TCATACGCTC
TGA
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| Protein sequence | MALDILIARS VERAGGWIGF DRFMALALYA PGLGYYANSS AKFGHMPSSG SDFVTAPELT
PMFGQALAAQ VAEALEKTGT DTVWEFGAGT GALAVQLLHA LDEIGRGDVR YRIVDLSGTL
RERQQQALAR YTDRVEWLGE LPEAMQGVVV GNEVLDAMPV QLLARVGGQW FERGVVRNVR
ADGWAWADRE TALRPPFEVP GEHDYLTEIH PQAEAFVATL ADRLKSGAAF FIDYGFPERE
YYHPQRHMGT VMCHRAHQAD GDPLSDVGYK DITAHVNFTG IALAGQEAGL EVLGYTSQAR
FLLNCGLLER MGQGSTAERG MAARLVHEHE MGELFKVVGF AVGEGWEAMG FAEGDRSHTL
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