Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0974 |
Symbol | |
ID | 7970149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1073787 |
End bp | 1074716 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791570 |
Product | PP-loop domain protein |
Protein accession | YP_002942891 |
Protein GI | 239813981 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.441228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCG TCTGGATCGA CGAGGCGCCC GTCGCCGGCG CCGCCACCAA TTCCCTGAAG ATCGAGCGCG AAACGCACAA GCTCGAGAAG CGCCTGTGCC GCGAAGTCGG CCGCGCCATC GTCGACTACA ACATGATCGA GGAGGGCGAC AAGGTCATGG TGTGCGTCTC GGGCGGGAAG GACAGCTACG CCATGCTGGA CATCCTGCTC AAGCTCAGGG CCCGCGCACC GATCCACTTC GACATCGTCG CGGTCAACCT CGACCAGAAG CAGCCCGGCT TCCCCGAAGA GGTGCTGCCC AGATACCTGA GCGAGCTCGG CGTGGACTTC CACATCGAGA ACCAGGACAC CTACAGCATC GTCAAGCGCG TGATCCCCGA GGGCAAGACC ACCTGCGGCC TGTGCAGCCG GCTGCGCCGC GGCATCCTGT ACCGCGTGGC GGACGAACTG GGCGCCACCA AGGTCGCGCT CGGCCACCAC CGCGACGACA TGCTGCAGAC CTTCTTCCTC AACATGTTCT TCGCGGGCAA GCTCAAGAGC ATGCCGCCCA AGCTGGTGAG CGACGACGGC AAGCACATCG TGATCCGCCC GCTCGCCTAC GTGGCCGAGA AAGACCTGGT GCGCTGGGCC CAGCACCGCG AATTCCCGAT CATTCCGTGC ACGCTCTGCG GCAGCCAGGA AAACCTGCAG CGCAAGCAGG TCGGCGAAAT GCTGCGCGAG TGGGACAGGA AGCACCTCGG CCGCGTGGAG AACATGTTCA CCGCGCTGCA GAACGTGGTG CCCTCGCACC TGCTCGACGG AACGCAGCAC GACTTCAAGG GTCTGAAGGC GACCGGCGTG GCCGACGAAG ACGGCGACAA GGCCTTCGAC ACGCCCTCCT TCGACCTGCT CTCCCAGGCA CCTGCAGCCC TGCGCATCCT CCAGGGCTGA
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Protein sequence | MNAVWIDEAP VAGAATNSLK IERETHKLEK RLCREVGRAI VDYNMIEEGD KVMVCVSGGK DSYAMLDILL KLRARAPIHF DIVAVNLDQK QPGFPEEVLP RYLSELGVDF HIENQDTYSI VKRVIPEGKT TCGLCSRLRR GILYRVADEL GATKVALGHH RDDMLQTFFL NMFFAGKLKS MPPKLVSDDG KHIVIRPLAY VAEKDLVRWA QHREFPIIPC TLCGSQENLQ RKQVGEMLRE WDRKHLGRVE NMFTALQNVV PSHLLDGTQH DFKGLKATGV ADEDGDKAFD TPSFDLLSQA PAALRILQG
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