| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0974 |
|---|
| Symbol | |
|---|
| ID | 7970149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 1073787 |
|---|
| End bp | 1074716 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644791570 |
|---|
| Product | PP-loop domain protein |
|---|
| Protein accession | YP_002942891 |
|---|
| Protein GI | 239813981 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.441228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TCTGGATCGA CGAGGCGCCC GTCGCCGGCG CCGCCACCAA TTCCCTGAAG
ATCGAGCGCG AAACGCACAA GCTCGAGAAG CGCCTGTGCC GCGAAGTCGG CCGCGCCATC
GTCGACTACA ACATGATCGA GGAGGGCGAC AAGGTCATGG TGTGCGTCTC GGGCGGGAAG
GACAGCTACG CCATGCTGGA CATCCTGCTC AAGCTCAGGG CCCGCGCACC GATCCACTTC
GACATCGTCG CGGTCAACCT CGACCAGAAG CAGCCCGGCT TCCCCGAAGA GGTGCTGCCC
AGATACCTGA GCGAGCTCGG CGTGGACTTC CACATCGAGA ACCAGGACAC CTACAGCATC
GTCAAGCGCG TGATCCCCGA GGGCAAGACC ACCTGCGGCC TGTGCAGCCG GCTGCGCCGC
GGCATCCTGT ACCGCGTGGC GGACGAACTG GGCGCCACCA AGGTCGCGCT CGGCCACCAC
CGCGACGACA TGCTGCAGAC CTTCTTCCTC AACATGTTCT TCGCGGGCAA GCTCAAGAGC
ATGCCGCCCA AGCTGGTGAG CGACGACGGC AAGCACATCG TGATCCGCCC GCTCGCCTAC
GTGGCCGAGA AAGACCTGGT GCGCTGGGCC CAGCACCGCG AATTCCCGAT CATTCCGTGC
ACGCTCTGCG GCAGCCAGGA AAACCTGCAG CGCAAGCAGG TCGGCGAAAT GCTGCGCGAG
TGGGACAGGA AGCACCTCGG CCGCGTGGAG AACATGTTCA CCGCGCTGCA GAACGTGGTG
CCCTCGCACC TGCTCGACGG AACGCAGCAC GACTTCAAGG GTCTGAAGGC GACCGGCGTG
GCCGACGAAG ACGGCGACAA GGCCTTCGAC ACGCCCTCCT TCGACCTGCT CTCCCAGGCA
CCTGCAGCCC TGCGCATCCT CCAGGGCTGA
|
|---|
| Protein sequence | MNAVWIDEAP VAGAATNSLK IERETHKLEK RLCREVGRAI VDYNMIEEGD KVMVCVSGGK
DSYAMLDILL KLRARAPIHF DIVAVNLDQK QPGFPEEVLP RYLSELGVDF HIENQDTYSI
VKRVIPEGKT TCGLCSRLRR GILYRVADEL GATKVALGHH RDDMLQTFFL NMFFAGKLKS
MPPKLVSDDG KHIVIRPLAY VAEKDLVRWA QHREFPIIPC TLCGSQENLQ RKQVGEMLRE
WDRKHLGRVE NMFTALQNVV PSHLLDGTQH DFKGLKATGV ADEDGDKAFD TPSFDLLSQA
PAALRILQG
|
|---|
| |