Gene Vapar_0949 details

Gene Information

• Locus tag: Vapar_0949
• ID: 7970124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1042910
• End bp: 1043371
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644791545
• Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
• Protein accession: YP_002942866
• Protein GI: 239813956
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTGC GCAAACTCAA GACACTGATC GATTTGGTGT CGGAATCCAA TATTTCCGAA 
CTGGAAATCA CTGAAACCGA AGGCAAGGTT CGCATCGTCA AGGGCGGCGG CGCTGCCCCG 
GTGCAATATG TACAGACCGT GGCGGCTGCA CCCGCTGCTG CTCCTGCCGC CGGCGCACCG 
GCAGCACCCG CGCTTCCCAG CGCCCCCGCA CCTGAAGCGG CACCCGCCGG CCATGCGATC 
AAGTCGCCGA TGGTGGGTAC TTTCTACCGC TCTTCCAGCC CGGGTGCCCC GGCCTTCGTC 
GAGATCGGCA GCAAGGTCAA CGAGGGCGAC ACGGTCTGCA TCATCGAAGC GATGAAGATC 
CTCAACGAAA TCGAAGCTGA CAAGTCCGGC ACGATCACCC AGATCCTCGG CGAAAACGGT 
CAGGCGGTCG AATACGGCCA GCCACTGTTC ATCATCGAGT GA 

 

Protein sequence

MDLRKLKTLI DLVSESNISE LEITETEGKV RIVKGGGAAP VQYVQTVAAA PAAAPAAGAP 
AAPALPSAPA PEAAPAGHAI KSPMVGTFYR SSSPGAPAFV EIGSKVNEGD TVCIIEAMKI 
LNEIEADKSG TITQILGENG QAVEYGQPLF IIE