Gene Vapar_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0938 
Symbol 
ID7970113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1031503 
End bp1032096 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID644791534 
Productprotein of unknown function UPF0227 
Protein accessionYP_002942855 
Protein GI239813945 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.330656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGC AAACCACTCA CCTGTTGTAC CTGCACGGAT TCCGCTCCTC GCCCCGCTCC 
ACCAAGGCGC GGCTGATGGC AGCGCGCGTG GCCCGGGAGC ACCCCGACCT GCAGTGGTGG 
TGTCCGCAAC TGCCGCCCTC GCCGCGCGAA GCCATCGACA TGGTGATGAA GGGCATCGCG 
GACTGGCCGC GCAAGTCGAT GGCCGTGGTG GGCTCCTCGC TCGGCGGCTT CTATGCCACC 
TACGTGGCCG GCATGACGCG CTGCCGCACC GTGCTGCTGA ATCCGGCGGT GCATCCGGCG 
CGCGACCTGG CGCGCTACAT CGGCGACCAG ACCGCCTGGC ACGACCCGGC CGAGCACTTC 
TATTTCAAGC CCGAATACAT CCAGGAGTTG CGCACCATGG AGGTCGGCGC ACTCACCCGC 
CCCGAGCGCG TGCTGGCCAT CATCGCCAAG GGCGACGAAG CGCTCGACTG GCACGAAACC 
TCGGCGCGCT ATCCCGACAG CAACATCAAG CTGATCGAGG GCGGCGACCA TGCTCTGTCC 
GATTTCGAGG AAAACCACCT CGACGACGTG ATCGCGTTCA TCAATCCCGT CTGA
 
Protein sequence
MDPQTTHLLY LHGFRSSPRS TKARLMAARV AREHPDLQWW CPQLPPSPRE AIDMVMKGIA 
DWPRKSMAVV GSSLGGFYAT YVAGMTRCRT VLLNPAVHPA RDLARYIGDQ TAWHDPAEHF 
YFKPEYIQEL RTMEVGALTR PERVLAIIAK GDEALDWHET SARYPDSNIK LIEGGDHALS 
DFEENHLDDV IAFINPV