| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0929 |
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| Symbol | |
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| ID | 7970104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1022484 |
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| End bp | 1023806 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791525 |
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| Product | Glycine hydroxymethyltransferase |
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| Protein accession | YP_002942846 |
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| Protein GI | 239813936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.802509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCG CCCTCCAACG CCGCTCCTGG GTTCCCGCCG CCAGCGAAGA CCATGTGCTC
GCGATCGCCG CCGATGCCGC TGCGCGCGAT GCGCTGGGCA TCGCCGCCGA GATCGAAAGG
CTCGCCGACG ACAACCACCG CATCCACGAC CGCGAGGGCC TGAACCTCAA CCCCGCCACC
AACGTGATGA ACCCGGCCGC CGAGGCGCTG CTGTCGCGCG GCCTGGGCTC GCGGGCATCG
CTGGGCTACC CAGGGGACAA GTACGAAGTG GGGCTGGAGG CCATCGAGCG CATCGAGGTC
ATCGCGGCCG AACTGGCCGC CGAGGTGTTC GGCTCGAAGT TCGCCGAAGT GCGCGTGAGC
TCCGGCGCGC TGTCGAATCT CTATGTGTTC ATGGCAACCT GCCGGCCCGG CGACACGATC
ATTGCGCCGC CGCCGGCCAT CGGCGGCCAC GTCACGCACC ATGCGGCCGG CGCGGCCGGG
CTCTATGGAT TGAAGACGGT GCCCGCGCCG GTCGATGCCG ACGGCTACAC GGTCGACGCG
GCCGCGCTCG CCAGGCTCGC ACGCGAGGTG AAGCCGAAGC TCATCACCAT CGGCGGCAGC
CTGAATCTTT TTCCGCACCC GGTGCCTGCG ATCCGCGAGG TCGCGGACAG CGTGGGCGCC
AAACTGCTGT TCGACGCTGC GCACCTCTCG GGCATGGTGG CCGGCAAGGC CTGGCCGCAG
CCGCTCGAGG AGGGCGCGCA CGCGATCACC ATGAGCACCT ACAAGAGCCT CGGCGGACCG
GCCGGCGGGC TGATCGTGTC GAACGATGCG GCGCTGATGG AGCGCATCGA CGCCATCGCC
TACCCCGGCC TCACGGCCAA CTCCGATGCG GGCCGCACCG CGGCGCTGGC GCGCGGACTG
CTCGACTGGA AGGTGCACGG CAGGGCCTAC GCCGCGGCAA TGCGCGAGAC CGCGCAGGCG
CTGGCGCACG CGCTCGACGC CGAGGGCTTG CCGGTGTTCG CGAAGGCGCG CGGCTTCACG
CAGTCGCACC AGTTCGCGCT CGAGGCCGCG CACTGGGGCG GTGGGCAGCG CGCCGCGAAG
AAACTGGCCG AGGGCGGCTT GCTGGCCTGC GGCATCGGCC TGCCGATCGC GCCGGTCGAA
GGAGACATCA ACGGCCTGCG CCTGGGCGTG CCGGAGATCG TGCGGCTGGG CTTCACGCCC
GACGACATGC CGCAGCTTGC CTCGTGGATC GCGCGTGCGC TGGAGGGCGG CGGCGCATCG
GTGGCGGCCG AGGTGCGCGA GCGCCGCACG CGGCTCGGCG GCCTGCGCTA CATCGTGCGC
TGA
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| Protein sequence | MPAALQRRSW VPAASEDHVL AIAADAAARD ALGIAAEIER LADDNHRIHD REGLNLNPAT
NVMNPAAEAL LSRGLGSRAS LGYPGDKYEV GLEAIERIEV IAAELAAEVF GSKFAEVRVS
SGALSNLYVF MATCRPGDTI IAPPPAIGGH VTHHAAGAAG LYGLKTVPAP VDADGYTVDA
AALARLAREV KPKLITIGGS LNLFPHPVPA IREVADSVGA KLLFDAAHLS GMVAGKAWPQ
PLEEGAHAIT MSTYKSLGGP AGGLIVSNDA ALMERIDAIA YPGLTANSDA GRTAALARGL
LDWKVHGRAY AAAMRETAQA LAHALDAEGL PVFAKARGFT QSHQFALEAA HWGGGQRAAK
KLAEGGLLAC GIGLPIAPVE GDINGLRLGV PEIVRLGFTP DDMPQLASWI ARALEGGGAS
VAAEVRERRT RLGGLRYIVR
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