| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0920 |
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| Symbol | murC |
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| ID | 7970095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1013668 |
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| End bp | 1015125 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791516 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_002942837 |
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| Protein GI | 239813927 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.350013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACG CGATTCGTCA CATCCATTTC GTGGGCATCG GCGGCTCGGG CATGAGCGGC
ATCGCCGAAG TGCTGTTCAA CCTGGGCTAC CGCATCACCG GCTCCGACCT GGCCGACAGC
GCCACCTTGC GCCGGCTTGC CGGCCTGGGC ATCGGTACCT TCGTGGGCCA CGCCGCCGCG
CACATCGACG GCGCGGATGC GGTGGTCACT TCCACCGCGG TGCAGTCGGA CAACCCCGAG
GTGCTGGCCG CGCGCGAGAA GCGCATTCCG GTGGTGCCGC GCGCGCTCAT GCTGGCCGAG
CTGATGCGCC TCAAGCAGGG CATCGCGATC GCGGGCACGC ACGGCAAGAC CACCACCACC
AGCCTGGTGG CGAGCGTGCT CGACGCGGCC GGGCTCGACC CGACCTTCGT GATCGGCGGG
CGCCTGAACA GTGCCGGCGC CAATGCGCAG CTCGGCAGCG GCGACTACAT CGTGGTGGAG
GCCGACGAGT CGGACGCCTC GTTCCTGAAC CTGCTGCCCG TCATGGCGGT GGTCACGAAC
ATCGACGCCG ACCACATGGA AACCTACGGG CACGACTTCG CGAAGCTCAA GAAGGCTTTC
GTCGACTTCC TGCACCGCAT GCCGTTCTAT GGCGTGGCCA TCCTGTGCAC CGACGATCCT
GCGGTGCGCG ACATCGTGGC CGAAGTCACC TGCCCGGTGA CGAGCTACGG CTTTGGCGAA
GAGGCCCAGG TGCGCGCGAT CGACGTGCGC GCAGTGGGCG GCCAGATGCA CTTCACCGCG
CAGCGGCGCA ACGGCGTCAC GCTGCCCGAC CTGCCGATCG TGCTGAACCT GCCGGGCGAG
CACAACGTGC GCAATGCGCT CTCGGTGATC GCGGTGGCGG TGGAACTCGG CATTCCCGAC
GAAGCGGTGC AGCGCGGCCT GGCCGGCTTC AAGGGCGTGG GCCGCCGCTT CCAGAGCTAT
GGCGAGGTGG CCGCGCAGGG CGAGCCGGCC GGCAGCTTCA CCGTGATCGA CGACTACGGC
CACCACCCGG TGGAGATGGC CGCAACCATT GCCGCCGCGC GCGGCGCGTT CCCGGGACGA
CGGCTGGTGC TGGCCTTCCA GCCGCACCGC TACACCCGCA CGCGCGACTG CTTCGAGGAC
TTCGTCAAGG TCATCGGCAA TGCCGACGCG GTGCTGCTGG GCGAGGTCTA TGCCGCGGGC
GAGCCGCCCA TCGTGGCGGC GGACGGCCGC ACGCTGGCGC GCGCCCTGCG CGTGGCCGGC
AAGGTGGAGC CGGTGTTCGT CGACGACATC GGCGCCATGC CGCAGGCCAT CCTGGACAAC
GCGCGCGCCG GCGACGTGGT GCTTTGCATG GGCGCCGGCT CCATCGGCGC CGTGCCGGGC
AAGGTGGTTG AAATTGCAGC CGCGGCATCG CTGCCGCAAC AAACAACGCG CACCAGGCGC
AAGGGGGAGG CATCATGA
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| Protein sequence | MKHAIRHIHF VGIGGSGMSG IAEVLFNLGY RITGSDLADS ATLRRLAGLG IGTFVGHAAA
HIDGADAVVT STAVQSDNPE VLAAREKRIP VVPRALMLAE LMRLKQGIAI AGTHGKTTTT
SLVASVLDAA GLDPTFVIGG RLNSAGANAQ LGSGDYIVVE ADESDASFLN LLPVMAVVTN
IDADHMETYG HDFAKLKKAF VDFLHRMPFY GVAILCTDDP AVRDIVAEVT CPVTSYGFGE
EAQVRAIDVR AVGGQMHFTA QRRNGVTLPD LPIVLNLPGE HNVRNALSVI AVAVELGIPD
EAVQRGLAGF KGVGRRFQSY GEVAAQGEPA GSFTVIDDYG HHPVEMAATI AAARGAFPGR
RLVLAFQPHR YTRTRDCFED FVKVIGNADA VLLGEVYAAG EPPIVAADGR TLARALRVAG
KVEPVFVDDI GAMPQAILDN ARAGDVVLCM GAGSIGAVPG KVVEIAAAAS LPQQTTRTRR
KGEAS
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