Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0859 |
Symbol | |
ID | 7972074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 946616 |
End bp | 947488 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791457 |
Product | heat shock protein HtpX |
Protein accession | YP_002942778 |
Protein GI | 239813868 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACGTA TCCTTCTGTT CGTTTTGACC AATGTGATGG TCGTTGCAGT GCTCGGCATC GTCGCCAGCC TGCTCGGCGT CAACCGCTTT CTGACGGCCA ACGGGCTGAA CCTCACGGCG CTGCTCGGCT TCGCGCTCGT CATGGGCTTT GGCGGCGCGA TCATTTCGCT CCTGATCAGC AAGCCCATGG CCAAGTGGAC CACCAAGCTG CACATGATCG ACAACCCCCA GTCGCCGGAC GAGGCCTGGA TCGTCGGCAC GGTGCGCAAG TTTGCCGACA AGGCCGGCAT CGGCATGCCC GAGGTCGGCA TCTTCGAGGG CGAGCCCAAT GCCTTCGCGA CCGGCGCGTT CAAGAACTCG TCGCTGGTGG CGGTGTCCAC CGGCCTGCTG CAGAACATGA CGCGCGAAGA AGTCGAGGCC GTGATCGGCC ACGAAGTGGC GCACATCGCC AACGGCGACA TGGTCACCAT GACGCTGATC CAGGGCGTGA TGAACACCTT CGTCGTGTTC CTCTCGCGCG TGATCGGCTA TGCGGTCGAC AGCTTCCTGC GCCGCGGCGA CGACCGTTCG TCGGGCCCGG GCATCGGCTA CTACGTGAGC ACCATCGTGC TGGACATCGT GTTGGGCTTT GCCGCCGCGA TCGTGGTGGC GTGGTTCTCG CGCCAGCGCG AATTCCGCGC CGACGCCGGC TCGGCCGCGC TCATGGGCCA GAAGCAGCCG ATGATGAATG CGCTGGCGCG CCTGGGCGGC CTGCCGGCCG GCGAACTGCC CAAGGCGGTG GAAGCCATGG GCATCACGGG CAGCATCGGC AAGCTCTTTG CCACGCACCC GCCGATCGAA GAGCGCATTG CGGCGCTGCA GAACGCGCGC TGA
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Protein sequence | MKRILLFVLT NVMVVAVLGI VASLLGVNRF LTANGLNLTA LLGFALVMGF GGAIISLLIS KPMAKWTTKL HMIDNPQSPD EAWIVGTVRK FADKAGIGMP EVGIFEGEPN AFATGAFKNS SLVAVSTGLL QNMTREEVEA VIGHEVAHIA NGDMVTMTLI QGVMNTFVVF LSRVIGYAVD SFLRRGDDRS SGPGIGYYVS TIVLDIVLGF AAAIVVAWFS RQREFRADAG SAALMGQKQP MMNALARLGG LPAGELPKAV EAMGITGSIG KLFATHPPIE ERIAALQNAR
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