| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0823 |
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| Symbol | |
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| ID | 7972038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 905584 |
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| End bp | 907461 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791421 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942742 |
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| Protein GI | 239813832 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCA GCGGCGAAGC CCTACCTCCT CCCCCCCACA GCGCCACCGG CCATGCGCCG
GCGCGCAGCG ACCGCTCCGA CTGGGCGACG CTGCGCCGCC TTTTCCCCTA TCTCTGGCAG
TACAAGTGGC GGGTGATCGC CGCGCTCGGC TTCATGGTGG GCGCCAAGGT GGCCAACGTG
GGCGTGCCGG TGCTGCTCAA GAACCTGATC GACACGATGA CGCCCAAGCC GGACATGGCG
CAGGCGCTGC TGATCGTGCC CATCGGGCTC CTGCTGGCCT ACGGGCTGCT GCGCTTTTCG
ACCGCGCTCT TCGGCGAGCT GCGCGAGCTG ATCTTCGCCA AGGCCACCGA GGGCACGGCG
CGGCAGATTG CGCTGGAGGT GTTCGGCCAC CTGCATTCGC TGAGCCTGCG CTTCCACCTG
GAGCGCCAGA CCGGCGGCAT GACGCGCGAC ATCGAGCGCG GCACGCGCGG CGTGCATTCG
CTCATCTCGA TGTCGCTCTA CAGCATCGTG CCCACCATCA TCGAACTGGC GCTGGTGCTC
ACCATCCTGG GCGTGAAGTT CGATTCGCTG TTCGTCTGGA TCACGGGCGC GGCGCTGGTG
CTCTACATCA CCTTCACGGT CACCGTGACC GAGTGGCGCA CCCAGTTCCG CAAGACCATG
AACGAGCTCG ACTCCATGGC CCAGAGCCGC GCGGTCGATT CGCTGCTGAA CTACGAAACC
GTCAAGTACT TCAACAACGA GGAATTCGAG GCGAAACGCT ACGACGCCAG CCTGGACCGC
TACCGCAAGG CCGCCATCAA GAGCCAGCGC ACGCTGAGCA TGCTCAACAC CGGCCAGCAG
CTGATCATCG CGACCAGCCT GGTGCTGATG CTCTGGCGCG CCACCTCGGG CGTGGTCGAA
GGGCGCATGA CGCTGGGCGA CCTGGTGATG GTCAACGCCT TCATGATCCA GCTCTACATT
CCGCTCAACT TCCTGGGCGT GATCTACCGC GAGATCAAGC AGAGCCTGAC CGACCTGGAC
AAGATGTTCG TGCTGATGGA GAAGGAGCGC GAAGTGCGCG ACGCGCCCGG CGCGCAGCCG
CTGTCTTTGC TCCCTCTCCC TCCGGGAGAG GGCAGGGGTG AGGGCGGCGG CGTCGACTCC
ACCATCCGCT TCGAGGACGT GAGCTTCGCC TACGAGCCCG ACCGGCCGAT CCTCAAGCAC
GTGAGCTTCG AGATCCCGGC CGGCAAGACG GTGGCTGTGG TCGGCCCCTC GGGCTCGGGC
AAGTCGACGC TCGCGCGGCT GCTCTACCGC TTCTACGACG TGCAGCAGGG CCGCATCACC
ATCGGCGGGC AGGACATCCG CGAAGTGCAG CAGTCCAGCG TGCGCCGCGC GATCGGCATC
GTGCCGCAGG ACACGGTGCT GTTCAACGAC ACGGTCGAAT ACAACATCGC CTACGGCCGC
CCCGGTGCCA CGCGCGAAGA GGTGGAAGGC GCAGCCCGCG CCGCGCGCAT CCACGACTTC
ATCGCCGCCA CGCCCAGGGG CTATGAAACC ACCGTGGGCG AGCGCGGCCT CAAGCTGTCG
GGCGGCGAGA AGCAGCGCGT GGCCATTGCG CGTACGCTGC TGAAGAACCC GCCGATCGTG
ATCTTCGACG AGGCCACCTC GGCGCTCGAT TCGGCCAACG AGCGCGCCAT CCAGTCGGAG
CTCAGGAGCG CCGCGCAGGA CAAGACCACG CTGGTGATCG CGCACCGCCT GTCGACGGTG
GTCGATGCGC ACGAGATCCT GGTGCTCGAA GCGGGCGTGA TCGTCGAGCG CGGCACGCAT
GCCGAGCTGC TTGCCAGACA GGGCCGTTAT GCGCAGATGT GGGCTTTGCA AAAGAGCGAA
GCCACGCCGC TGATGTAG
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| Protein sequence | MRRSGEALPP PPHSATGHAP ARSDRSDWAT LRRLFPYLWQ YKWRVIAALG FMVGAKVANV
GVPVLLKNLI DTMTPKPDMA QALLIVPIGL LLAYGLLRFS TALFGELREL IFAKATEGTA
RQIALEVFGH LHSLSLRFHL ERQTGGMTRD IERGTRGVHS LISMSLYSIV PTIIELALVL
TILGVKFDSL FVWITGAALV LYITFTVTVT EWRTQFRKTM NELDSMAQSR AVDSLLNYET
VKYFNNEEFE AKRYDASLDR YRKAAIKSQR TLSMLNTGQQ LIIATSLVLM LWRATSGVVE
GRMTLGDLVM VNAFMIQLYI PLNFLGVIYR EIKQSLTDLD KMFVLMEKER EVRDAPGAQP
LSLLPLPPGE GRGEGGGVDS TIRFEDVSFA YEPDRPILKH VSFEIPAGKT VAVVGPSGSG
KSTLARLLYR FYDVQQGRIT IGGQDIREVQ QSSVRRAIGI VPQDTVLFND TVEYNIAYGR
PGATREEVEG AARAARIHDF IAATPRGYET TVGERGLKLS GGEKQRVAIA RTLLKNPPIV
IFDEATSALD SANERAIQSE LRSAAQDKTT LVIAHRLSTV VDAHEILVLE AGVIVERGTH
AELLARQGRY AQMWALQKSE ATPLM
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