| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0796 |
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| Symbol | |
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| ID | 7971848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 878042 |
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| End bp | 878752 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791394 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942715 |
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| Protein GI | 239813805 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.787877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGT TGCTGGACAT CCAGGGCCTG CGCGGCGGCT ACGGCCGCGT CGAGGTGCTG
CGCGGCGTCG ACCTGCAGGT GAACGCCGGT GAAATGGTCG CGCTGCTCGG CAGCAACGGC
GCGGGCAAGT CCACCCTCAA CAAGATGGTC TGCGGCCTGT GCCCCGCCTG GGGCGGCACG
GTGCGCTTCG ATGGCAAGGA CCTGAGCGGC GCGCACTATC GCGACGTGGT GAAGGCCGGC
CTCATCCAGG TGCCCGAGGG CCGCAAGGTG TTTCCCAACC TCAGCGTGCT GGAGAACCTG
GAGCTCGGCT CCTTCACTCG CGCCCGCGAG CGCCGCGCGG CCAACGTCGA GAAGATGTTC
CACATCTTCC CGCGGCTGCG GGAACGCATG GCGCAGCACG CCGGCACCAT GAGCGGCGGC
GAGCAGCAGA TGCTGGCCAT CGCGCGCGGG CTCATGGCCG AGCCCGTGCT GCTGATCCTC
GACGAGCCCT CGCTCGGCCT CTCGCCGCGG CTGGTGGAGG AGATGTTCAC GCTGATCCGC
GAACTGCGCG ACGGCGGCCT CGCGGTGCTG CTGGTGGAGC AGAACGTGGG CCAGTCGCTC
GAGATCGCGG ACCGCGCGTA CGTGCTGGAG AACGGCAGTG TTCGCTTTTC GGGCCTCCCC
GGCGAGCTGC TCGGAAGCGA CGAACTGCGG CGCGCCTACC TGGGGCTCTG A
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| Protein sequence | MTALLDIQGL RGGYGRVEVL RGVDLQVNAG EMVALLGSNG AGKSTLNKMV CGLCPAWGGT
VRFDGKDLSG AHYRDVVKAG LIQVPEGRKV FPNLSVLENL ELGSFTRARE RRAANVEKMF
HIFPRLRERM AQHAGTMSGG EQQMLAIARG LMAEPVLLIL DEPSLGLSPR LVEEMFTLIR
ELRDGGLAVL LVEQNVGQSL EIADRAYVLE NGSVRFSGLP GELLGSDELR RAYLGL
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