Gene Vapar_0777 details

Gene Information

• Locus tag: Vapar_0777
• Symbol: slmA
• ID: 7971829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 859373
• End bp: 860026
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644791375
• Product: nucleoid occlusion protein
• Protein accession: YP_002942696
• Protein GI: 239813786
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAACG AAGAGACAAG CTATCCCGGC ATAGAAACCC AGACCGAAAC GCTGACGCCC 
GTCGCGCCGG TCCGAAAACG CCCCAAGCCC GGGGAGCGGC GCGTGCAGAT CCTGCAGGCG 
CTGGCCGCCA TGCTCGAGCA GCCCGGCGCC GAGCGCGTGA CCACCGCGGC ACTGGCTGCG 
CGGCTCGACG TCAGCGAGGC CGCGCTCTAC CGCCACTTTG CGAGCAAGGC GCAGATGTTC 
GAGGGCCTGA TCGACTTCAT CGAGCAGAGC GTCTTCACGC TGGTGAACCA GATCCTCGAG 
CGCGAAGGCG CAACGGGGGC CCAGCAGGCC GCAAAAATTC TCACGCTGCT CGTGCAGTTT 
GCCGAGCGCA ACCCGGGCAT GACGCGCGTC ATGGTGGGCG ATGCGCTGGT GTTCGAGAAC 
GAGCGCCTCC AGCAGCGCAT GAACCAGTTC TTCGACAAGA TCGAGGCCAC GCTGCGACAG 
GTGCTGCGCG GGGCGGCCGC CGCGGACGGC TCGGCCACCC CGAGCGTGGA TGCGCAGGTG 
CGCGCCGCCG CGCTCACGGC CTTCGTGGTC GGGCAGCTGC AGCGCTTCAC GCGCTCGGGC 
TTCCGCCGGG CGCCGTCGGA GCACCTCGAA GCCACGATCG CGCTGATCGT CTGA 

 

Protein sequence

MQNEETSYPG IETQTETLTP VAPVRKRPKP GERRVQILQA LAAMLEQPGA ERVTTAALAA 
RLDVSEAALY RHFASKAQMF EGLIDFIEQS VFTLVNQILE REGATGAQQA AKILTLLVQF 
AERNPGMTRV MVGDALVFEN ERLQQRMNQF FDKIEATLRQ VLRGAAAADG SATPSVDAQV 
RAAALTAFVV GQLQRFTRSG FRRAPSEHLE ATIALIV